Click here to switch to the map view.

The map label for this gene is 18311197

Identifier: 18311197

GI number: 18311197

Start: 2536618

End: 2538180

Strand: Reverse

Name: 18311197

Synonym: CPE2215

Alternate gene names: NA

Gene position: 2538180-2536618 (Counterclockwise)

Preceding gene: 18311198

Following gene: 18311196

Centisome position: 83.73

GC content: 28.85

Gene sequence:

>1563_bases
TTGGTTAATTTAGATATTATTAAAGAAAGTCTTGGGTTTGAGAAGGTCTTAAGTGAAAACTCTTTAGATATACCTTTTAG
AGAAGAATACTTAATACCAGATACTCAACCAGATGTTCATGATGTACTTTCAGTTGATACTAAAGTATATGTACTTAACA
GAGAAGTTCAAAGTGATAGAGTATTATTAGAATATGAAGTTGAGTGTAATATTATGTACTTAGCTAGAGAAGAAGATGGT
TTAGGGATAAATAGCGTTATTTATAAAGAAAAAAATTCTAGCTTTATTGATATAGCTGGGGCTGAACATAGTATGATGTG
TGATATGGAATGTGATTTAGAACATATCGATGCGAACATAATCAATGAAAGAAAGATAAGAGTAGAAGGAAAACTAAGAA
CCAAGTACAGGGTTTATAAAGAAGAAAAAATAGATGTTGTTAAAGAATTAGATGGTTTAGGAGATTTACAAATAAAAAGA
AAACCAGAAAGTATAGAGAAGAATATTACAAATATGGTTTGTTCAATGAGTGGAGAATTACCTATAAACGTAGGAATGGA
TAAACCTCAAATAGGAAAAATAATAAAATGTGGATATATGCTTCATAGACAAGAGATAAAATTAGGAGAAGATAAAGTAC
AAGCATCTTGCTTGGCTAAAATCAATGTTCTTTATAGAGCTTATGATTCTAGAGAAGTTGTAGCTTTAGAAGAGGATTTA
TATTTATCTAATGATGAAGAGGTTGTAGGTGTAAATTCAGATATGAATTGTAATGGATATTTTGAAATCAAAGGTCATGA
TGTGAAAATTTCTCAAAATGATTTAGGAGAAAGTAGAATAATAGATGTTAATTTATCTGTTGATGCAAATGTTGCAATAT
CAAAATTAGAATTTGCAGAAACAGTTGAAGATTTATATTCACCAACGAAAAATGTAATGCCTTTAAAGGAAGTTTGCAAG
ATTAATATGGCTGTTAGTGAAAATTCAAATGAATCAGTAATAAAAGGAAATATAGACTTGGGAAAAAATGGAGTAGATGC
CACTCAAACAGTTGATTGCAAAGGTAAAATAGTAGATATGGAAAGCTATTTTATGGATCAAAAGGTTGTTATAAAGGGTA
ATTTATCTGTTGAATCAATATACAAGACAACTGATGAGGAAAAGGGACTTAATAAAGTAGGTGGAGAAATTCCTTTTGAA
GTTGCTTTAGATATGCCAAATTCTCAGTCTGGTATGACTTTTGATACTAAGGCTAATTTAGAAGATTTACAATGTAGTAT
AGAAGGAAATAGCTTAGCAGTTAAAGCTGTAGTATATTTTTATGCTAAATGTTCAGATGTTTTTGATAAAGAATATGTTA
AAGATATTGAACAAAATGATGACACTGTTGAAAAGAAAGCATCCATTACTATATACACAATTCAAAAAGGTGATACTTTG
TGGAATTTAGCAAAAAAATACAAGACAACAATAGATACTTTAGTTAAATTAAATGATATAGAAGATCCAGATTCTATATA
TGCTGGTGATAAAATTATGATTCCAGGAAGAGCAGTTTTATAA

Upstream 100 bases:

>100_bases
TTTCAATAAAAAAATAAATAAAGTATCAATAATAAGAATTATCATAAATTAATTATCATACATATATATTATAGTATTAG
ATTATTTAGGAGGGATACAT

Downstream 100 bases:

>100_bases
AAAAAAGAGTTTTACGATATTATGTCGTAAAACTCTTTTTTATGAATAAATATAAATTTTATGGCAAAAATAAGAAATGC
ATGATTTGAGGTGAATAATT

Product: lysM domain protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Hydrolase; Spore Coat Assembly Protein SafA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDRVLLEYEVECNIMYLAREEDG
LGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANIINERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKR
KPESIEKNITNMVCSMSGELPINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDL
YLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAETVEDLYSPTKNVMPLKEVCK
INMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDMESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVGGEIPFE
VALDMPNSQSGMTFDTKANLEDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTL
WNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL

Sequences:

>Translated_520_residues
MVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDRVLLEYEVECNIMYLAREEDG
LGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANIINERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKR
KPESIEKNITNMVCSMSGELPINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDL
YLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAETVEDLYSPTKNVMPLKEVCK
INMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDMESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVGGEIPFE
VALDMPNSQSGMTFDTKANLEDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTL
WNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL
>Mature_520_residues
MVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDRVLLEYEVECNIMYLAREEDG
LGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANIINERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKR
KPESIEKNITNMVCSMSGELPINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDL
YLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAETVEDLYSPTKNVMPLKEVCK
INMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDMESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVGGEIPFE
VALDMPNSQSGMTFDTKANLEDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTL
WNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58528; Mature: 58528

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDR
CCCHHHHHHHCCHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHCCCEEEEEEECCCCCCE
VLLEYEVECNIMYLAREEDGLGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANI
EEEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCHHHCCCEE
INERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKRKPESIEKNITNMVCSMSGEL
ECCEEEEEEEEEEEEEEEHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCC
PINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDL
EEEECCCCCCHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHEEEEEECCCCEEEEEECCE
YLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAE
EECCCCEEEECCCCCCCCEEEEEECCEEEECCCCCCCCEEEEEEEECCCCEEEEHHHHHH
TVEDLYSPTKNVMPLKEVCKINMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDM
HHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEH
ESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVGGEIPFEVALDMPNSQSGMTFDTKANL
HHHHCCCEEEEEECCCHHHHHHCCCHHCCHHHHCCCCCEEEEEECCCCCCCEEEECCCCC
EDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTL
CCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCHH
WNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL
HHHHHHHHHHHHHHEEECCCCCCCCEECCCEEECCCCCCC
>Mature Secondary Structure
MVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDR
CCCHHHHHHHCCHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHCCCEEEEEEECCCCCCE
VLLEYEVECNIMYLAREEDGLGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANI
EEEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCHHHCCCEE
INERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKRKPESIEKNITNMVCSMSGEL
ECCEEEEEEEEEEEEEEEHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCC
PINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDL
EEEECCCCCCHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHEEEEEECCCCEEEEEECCE
YLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAE
EECCCCEEEECCCCCCCCEEEEEECCEEEECCCCCCCCEEEEEEEECCCCEEEEHHHHHH
TVEDLYSPTKNVMPLKEVCKINMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDM
HHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEH
ESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVGGEIPFEVALDMPNSQSGMTFDTKANL
HHHHCCCEEEEEECCCHHHHHHCCCHHCCHHHHCCCCCEEEEEECCCCCCCEEEECCCCC
EDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTL
CCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCHH
WNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL
HHHHHHHHHHHHHHEEECCCCCCCCEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA