Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18309920
Identifier: 18309920
GI number: 18309920
Start: 1137256
End: 1137930
Strand: Direct
Name: 18309920
Synonym: CPE0938
Alternate gene names: NA
Gene position: 1137256-1137930 (Clockwise)
Preceding gene: 18309919
Following gene: 18309921
Centisome position: 37.52
GC content: 22.67
Gene sequence:
>675_bases ATGGAATATCTAATTTATTCATTAATAGCAGTAATAATTTTAACAGTAGGTCTAAACAACATTTTTAAAAAGCAATCTAA ATATTTTTATATGTTGGCTACTTTAATATCAGTAGTAGTTACATCATATGAGATTTTTAAAATATGGACAGGCTTTAAAT TAGAAGGAATTATATTTGTTTTAGAAAGAAGCTTTATGAAAGGCTTTGTATCAACAGCATTATTTATTTTAGTAATGTTT GCAGGAGCTTTAAGTAAGAAATGGGGAATTACTAAAAAACTTTTAAGAGTTAGAGCAGAAATGGCAATTTTAGCATCTAT ACTTATATTACCTCATTTTATAATCTATACTTATAAGTTCTTAGTAAGATTATTTAGTGGAAAGCCATTAAGCATTTTAT ACATATCTTTTATAATAGTAGGATTAATAGCATTTATAATAATGATACCTCTATTTATAACATCATTTAAGAAAGTAAGA GTTACTATGTCACCAAGTAAATGGAAAATGGTTCAAAGATGGGCATATCCTTTTTATTTTCTAGTGTATTTACATATAAT ATTAATCTTATTTAATAAGAAAGTTTTTAATTTAAATGCTGTAATATTATATACAGTTATATTCTTAGGATATTTTATTT TAAGAATATGTAATAATAAAAAAGCTATTAAATAA
Upstream 100 bases:
>100_bases TTATTAATAATCTTTCTAAATTTTTAATTGACTTTTAATGAATTGTATAGTATTATTCTAAATGAAAATGATTGTCAGTA ACATATGGAAGGAGAAATCA
Downstream 100 bases:
>100_bases TATAAAAGTTAGTATTCTTACAAACTCCCTTTGTAGTAATAATTAAATTTTTACTATAAAGGGAGTATTTTATTATATAG TTAAAAGATAAAATAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MEYLIYSLIAVIILTVGLNNIFKKQSKYFYMLATLISVVVTSYEIFKIWTGFKLEGIIFVLERSFMKGFVSTALFILVMF AGALSKKWGITKKLLRVRAEMAILASILILPHFIIYTYKFLVRLFSGKPLSILYISFIIVGLIAFIIMIPLFITSFKKVR VTMSPSKWKMVQRWAYPFYFLVYLHIILILFNKKVFNLNAVILYTVIFLGYFILRICNNKKAIK
Sequences:
>Translated_224_residues MEYLIYSLIAVIILTVGLNNIFKKQSKYFYMLATLISVVVTSYEIFKIWTGFKLEGIIFVLERSFMKGFVSTALFILVMF AGALSKKWGITKKLLRVRAEMAILASILILPHFIIYTYKFLVRLFSGKPLSILYISFIIVGLIAFIIMIPLFITSFKKVR VTMSPSKWKMVQRWAYPFYFLVYLHIILILFNKKVFNLNAVILYTVIFLGYFILRICNNKKAIK >Mature_224_residues MEYLIYSLIAVIILTVGLNNIFKKQSKYFYMLATLISVVVTSYEIFKIWTGFKLEGIIFVLERSFMKGFVSTALFILVMF AGALSKKWGITKKLLRVRAEMAILASILILPHFIIYTYKFLVRLFSGKPLSILYISFIIVGLIAFIIMIPLFITSFKKVR VTMSPSKWKMVQRWAYPFYFLVYLHIILILFNKKVFNLNAVILYTVIFLGYFILRICNNKKAIK
Specific function: Unknown
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR007329 [H]
Pfam domain/function: PF01794 Ferric_reduct; PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 26144; Mature: 26144
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLIYSLIAVIILTVGLNNIFKKQSKYFYMLATLISVVVTSYEIFKIWTGFKLEGIIFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERSFMKGFVSTALFILVMFAGALSKKWGITKKLLRVRAEMAILASILILPHFIIYTYKF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLFSGKPLSILYISFIIVGLIAFIIMIPLFITSFKKVRVTMSPSKWKMVQRWAYPFYF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH LVYLHIILILFNKKVFNLNAVILYTVIFLGYFILRICNNKKAIK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEYLIYSLIAVIILTVGLNNIFKKQSKYFYMLATLISVVVTSYEIFKIWTGFKLEGIIFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERSFMKGFVSTALFILVMFAGALSKKWGITKKLLRVRAEMAILASILILPHFIIYTYKF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLFSGKPLSILYISFIIVGLIAFIIMIPLFITSFKKVRVTMSPSKWKMVQRWAYPFYF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH LVYLHIILILFNKKVFNLNAVILYTVIFLGYFILRICNNKKAIK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]