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The map label for this gene is ycaM [H]

Identifier: 18309919

GI number: 18309919

Start: 1135498

End: 1136967

Strand: Direct

Name: ycaM [H]

Synonym: CPE0937

Alternate gene names: 18309919

Gene position: 1135498-1136967 (Clockwise)

Preceding gene: 18309918

Following gene: 18309920

Centisome position: 37.46

GC content: 30.95

Gene sequence:

>1470_bases
ATGGGAAAGGATAAAAAAATAAAGTTATGGGCATTGGTAATGCTTATTTTTGTACCAACATTTGGGTTTGGTAATATAGC
AAGTAATGCTGTGTATTTAGGACCAGCAGCTATTCCATCCTGGGTAATAGTATCTATTCTTTATTTCTTACCTTTATGTG
GAATAATAGCAGAAATGGCTTCAGCAAATAGAGATAAAGAAGGCGGAATATATTCATGGATAAATAAAGCTTTAGGTGAA
AAATGGGCTTTTGTAGGAACTTGGACTTATTTCATAGGAATATTATTTTATTTACAAATGGTTTTTTCAAGAATACCAGT
AGCTGCATCATGGGCAATACTTGGAAAAAATGTATTTACTGATTCTAATGCATACTTATTACCGATTTTATCAATTGTAA
TATGTATAGCAATGACATATATAGCAACCATAGGCGTAAGTAAGTTTTCAAAACTTGCTGACTTGGGAGGACAATTTACT
TTAGGGGCAACTGTTATTTTTATATTAATGGCAATAGTAGGATATTTTATGGGAACACCTTCTGCTACAGAATTTACAGT
TCAAAATGTAATTCCTGATTTTAATGTGAGTTATTTTTCTACATTCTCATGGTTATTATTTGCAGTATCAGGATCAGAAG
TAGCTGGTACTTATATAATGCAAACAGAGAACCCTAAAAAGACATTTCCAAAGGCTATGATAATTGCAACAGCTTTAATA
GCATTCTCATACATTTTAGGTTCTGTAGCTATACAATTTATAGCATCACCAGAAGTTTTACAGAAGGCAGGAATTCAAGA
TGCAGGTTATGTTGTATATTATATATTAGCTAATAATTTTGGAATAAATGGTAAGGTTATAGTACAAGTATATGCGGCTA
TTAATTTAATAACATCAATAGCAGCCTATATAATTTGGATGGAATCACCAATAAGAGCCATGTTTGGAGAAGTTCCAAAG
GGAACATTTCCAAGTTTCTTAACTAAGAAGAGAAAAGATGGAACTTTAGTAAATGCTTTATGGACACAATGTGCAATTTT
AGTAGTATTAATATCAATACCTTTATTAGGAATAGGATCAATTAATGATTTCTTTAAATTATTAACAGATTTATCATCTC
TAGCAGTTGTTGTTCCATATGTAGTCTTAATATGTGCATTTATATCTTTTAGAAAACACAATAAAGATTTAGATTTTAAA
TTTTTTAAAAGTGATGCTTTAGCATACACAGTTGCAGGAATAGCTTTAGTGCTTTCTTGTGCTGGATTCTTTGGTGCTGG
CCTTCAAGACATTGTTGGAAGTTCAGGTAAAGACGCAACAATTTTAATAATAAAAACTTATGGGGGACCTGTTATTCTTA
TGGCTTTAGGTCTTGTTTTAAGAGCTTTATCTGAAAAGTCATATAAAAATAAGAGTTTAGGCAATGAGAATATTGAAGTT
GAAATTGTTGAAGAGAGTATATGTGAATAG

Upstream 100 bases:

>100_bases
ATTTATTATGTTAGTAGTATAATTTTAACATATTAAATATGAATAATAAATTAACAGATGTTAAATTAAATTTAAAAATG
TAAGCTAAGGAGAGTTTAAA

Downstream 100 bases:

>100_bases
ATTAAACAATAGTTTTAAAAAATAAGTTAGAGTGTGTGATATTTTCATATAACTTTATAGCTTAGATTAAGCAATAGTTT
TTTTAAAATTAAATATGGTA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MGKDKKIKLWALVMLIFVPTFGFGNIASNAVYLGPAAIPSWVIVSILYFLPLCGIIAEMASANRDKEGGIYSWINKALGE
KWAFVGTWTYFIGILFYLQMVFSRIPVAASWAILGKNVFTDSNAYLLPILSIVICIAMTYIATIGVSKFSKLADLGGQFT
LGATVIFILMAIVGYFMGTPSATEFTVQNVIPDFNVSYFSTFSWLLFAVSGSEVAGTYIMQTENPKKTFPKAMIIATALI
AFSYILGSVAIQFIASPEVLQKAGIQDAGYVVYYILANNFGINGKVIVQVYAAINLITSIAAYIIWMESPIRAMFGEVPK
GTFPSFLTKKRKDGTLVNALWTQCAILVVLISIPLLGIGSINDFFKLLTDLSSLAVVVPYVVLICAFISFRKHNKDLDFK
FFKSDALAYTVAGIALVLSCAGFFGAGLQDIVGSSGKDATILIIKTYGGPVILMALGLVLRALSEKSYKNKSLGNENIEV
EIVEESICE

Sequences:

>Translated_489_residues
MGKDKKIKLWALVMLIFVPTFGFGNIASNAVYLGPAAIPSWVIVSILYFLPLCGIIAEMASANRDKEGGIYSWINKALGE
KWAFVGTWTYFIGILFYLQMVFSRIPVAASWAILGKNVFTDSNAYLLPILSIVICIAMTYIATIGVSKFSKLADLGGQFT
LGATVIFILMAIVGYFMGTPSATEFTVQNVIPDFNVSYFSTFSWLLFAVSGSEVAGTYIMQTENPKKTFPKAMIIATALI
AFSYILGSVAIQFIASPEVLQKAGIQDAGYVVYYILANNFGINGKVIVQVYAAINLITSIAAYIIWMESPIRAMFGEVPK
GTFPSFLTKKRKDGTLVNALWTQCAILVVLISIPLLGIGSINDFFKLLTDLSSLAVVVPYVVLICAFISFRKHNKDLDFK
FFKSDALAYTVAGIALVLSCAGFFGAGLQDIVGSSGKDATILIIKTYGGPVILMALGLVLRALSEKSYKNKSLGNENIEV
EIVEESICE
>Mature_488_residues
GKDKKIKLWALVMLIFVPTFGFGNIASNAVYLGPAAIPSWVIVSILYFLPLCGIIAEMASANRDKEGGIYSWINKALGEK
WAFVGTWTYFIGILFYLQMVFSRIPVAASWAILGKNVFTDSNAYLLPILSIVICIAMTYIATIGVSKFSKLADLGGQFTL
GATVIFILMAIVGYFMGTPSATEFTVQNVIPDFNVSYFSTFSWLLFAVSGSEVAGTYIMQTENPKKTFPKAMIIATALIA
FSYILGSVAIQFIASPEVLQKAGIQDAGYVVYYILANNFGINGKVIVQVYAAINLITSIAAYIIWMESPIRAMFGEVPKG
TFPSFLTKKRKDGTLVNALWTQCAILVVLISIPLLGIGSINDFFKLLTDLSSLAVVVPYVVLICAFISFRKHNKDLDFKF
FKSDALAYTVAGIALVLSCAGFFGAGLQDIVGSSGKDATILIIKTYGGPVILMALGLVLRALSEKSYKNKSLGNENIEVE
IVEESICE

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=475, Percent_Identity=25.8947368421053, Blast_Score=185, Evalue=6e-48,
Organism=Escherichia coli, GI48994921, Length=456, Percent_Identity=26.3157894736842, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI87082380, Length=506, Percent_Identity=25.8893280632411, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1787768, Length=365, Percent_Identity=25.2054794520548, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 53153; Mature: 53022

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKDKKIKLWALVMLIFVPTFGFGNIASNAVYLGPAAIPSWVIVSILYFLPLCGIIAEMA
CCCCCHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SANRDKEGGIYSWINKALGEKWAFVGTWTYFIGILFYLQMVFSRIPVAASWAILGKNVFT
HCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DSNAYLLPILSIVICIAMTYIATIGVSKFSKLADLGGQFTLGATVIFILMAIVGYFMGTP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
SATEFTVQNVIPDFNVSYFSTFSWLLFAVSGSEVAGTYIMQTENPKKTFPKAMIIATALI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
AFSYILGSVAIQFIASPEVLQKAGIQDAGYVVYYILANNFGINGKVIVQVYAAINLITSI
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
AAYIIWMESPIRAMFGEVPKGTFPSFLTKKRKDGTLVNALWTQCAILVVLISIPLLGIGS
HHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
INDFFKLLTDLSSLAVVVPYVVLICAFISFRKHNKDLDFKFFKSDALAYTVAGIALVLSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
AGFFGAGLQDIVGSSGKDATILIIKTYGGPVILMALGLVLRALSEKSYKNKSLGNENIEV
HHHHCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
EIVEESICE
EEECHHHCC
>Mature Secondary Structure 
GKDKKIKLWALVMLIFVPTFGFGNIASNAVYLGPAAIPSWVIVSILYFLPLCGIIAEMA
CCCCHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SANRDKEGGIYSWINKALGEKWAFVGTWTYFIGILFYLQMVFSRIPVAASWAILGKNVFT
HCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DSNAYLLPILSIVICIAMTYIATIGVSKFSKLADLGGQFTLGATVIFILMAIVGYFMGTP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
SATEFTVQNVIPDFNVSYFSTFSWLLFAVSGSEVAGTYIMQTENPKKTFPKAMIIATALI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
AFSYILGSVAIQFIASPEVLQKAGIQDAGYVVYYILANNFGINGKVIVQVYAAINLITSI
HHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
AAYIIWMESPIRAMFGEVPKGTFPSFLTKKRKDGTLVNALWTQCAILVVLISIPLLGIGS
HHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
INDFFKLLTDLSSLAVVVPYVVLICAFISFRKHNKDLDFKFFKSDALAYTVAGIALVLSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH
AGFFGAGLQDIVGSSGKDATILIIKTYGGPVILMALGLVLRALSEKSYKNKSLGNENIEV
HHHHCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
EIVEESICE
EEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]