Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18309921
Identifier: 18309921
GI number: 18309921
Start: 1138271
End: 1138783
Strand: Direct
Name: 18309921
Synonym: CPE0939
Alternate gene names: NA
Gene position: 1138271-1138783 (Clockwise)
Preceding gene: 18309920
Following gene: 18309926
Centisome position: 37.55
GC content: 29.04
Gene sequence:
>513_bases TTGGAATTTAGACAAGCAAATATATCTGATTTAGATCAGATTGTGGAAATAATAGAATTATCGAAAAAATATCTTAAAGA AACTAAGGTTGATCAATGGCAAGATGGATATCCAGCAAAGGAAGATTTAAGAAGAGATATAGAAAGTGGAAATAGTTATG TATTAACTAATAAAGATGAAATTGTTGCTACCACTGTAATATCCTTAGATGGTGAAAGTACCTATAATTCAATATTTAAT GGGGAATGGATTACTAATGAAGAGTATATTGTTATGCATAGGGTTGCTGTTCATGAAAAATACAAGGGAAAAGGAATTTT CAAAGAATTAATAAAAGAGGCAGAGAGTTTGGCTTTAAATAAAGGGATTTTTAGCATAAAAATAGATACTCATAGAGATA ATATTTCTATGCAGAGGGCAGTAGTAAAAAATGATTTTAAAAGATGTGGAATAATATATTTAGGGGATGGAAGTGAAAGA ATAGCCTTTGAAAAAGTGTTGAAGTCTTTTTAG
Upstream 100 bases:
>100_bases TTGATTTTTTATAATTAAGATAAATTTTATTTTAAGGTAGACAAAATAGGAGTTTTAATATAAAATTTCATTTAAACTTT AGAAATTAGGGGGAGTAAAT
Downstream 100 bases:
>100_bases ACAAAATAAAAGTACTGGAATTTTTATGCCAGTACTTTTGTTTTATAAATTAATTAAATTTTAGAGTCTATTCAACTTCA TCAGCTAAAGCAGCAGGAAT
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; GNAT Family Acetyltransferase; Gcn5-Related N-Acetyltransferase; GNAT Family N-Acetyltransferase; Histone Acetyltransferase; Serine O-Acetyltransferase; Peptidyl-TRNA Hydrolase; Acetyltransferase Family
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MEFRQANISDLDQIVEIIELSKKYLKETKVDQWQDGYPAKEDLRRDIESGNSYVLTNKDEIVATTVISLDGESTYNSIFN GEWITNEEYIVMHRVAVHEKYKGKGIFKELIKEAESLALNKGIFSIKIDTHRDNISMQRAVVKNDFKRCGIIYLGDGSER IAFEKVLKSF
Sequences:
>Translated_170_residues MEFRQANISDLDQIVEIIELSKKYLKETKVDQWQDGYPAKEDLRRDIESGNSYVLTNKDEIVATTVISLDGESTYNSIFN GEWITNEEYIVMHRVAVHEKYKGKGIFKELIKEAESLALNKGIFSIKIDTHRDNISMQRAVVKNDFKRCGIIYLGDGSER IAFEKVLKSF >Mature_170_residues MEFRQANISDLDQIVEIIELSKKYLKETKVDQWQDGYPAKEDLRRDIESGNSYVLTNKDEIVATTVISLDGESTYNSIFN GEWITNEEYIVMHRVAVHEKYKGKGIFKELIKEAESLALNKGIFSIKIDTHRDNISMQRAVVKNDFKRCGIIYLGDGSER IAFEKVLKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19618; Mature: 19618
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFRQANISDLDQIVEIIELSKKYLKETKVDQWQDGYPAKEDLRRDIESGNSYVLTNKDE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC IVATTVISLDGESTYNSIFNGEWITNEEYIVMHRVAVHEKYKGKGIFKELIKEAESLALN EEEEEEEEECCCHHHHHHCCCCEECCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHH KGIFSIKIDTHRDNISMQRAVVKNDFKRCGIIYLGDGSERIAFEKVLKSF CCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHC >Mature Secondary Structure MEFRQANISDLDQIVEIIELSKKYLKETKVDQWQDGYPAKEDLRRDIESGNSYVLTNKDE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC IVATTVISLDGESTYNSIFNGEWITNEEYIVMHRVAVHEKYKGKGIFKELIKEAESLALN EEEEEEEEECCCHHHHHHCCCCEECCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHH KGIFSIKIDTHRDNISMQRAVVKNDFKRCGIIYLGDGSERIAFEKVLKSF CCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA