Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is fur1 [H]
Identifier: 17547466
GI number: 17547466
Start: 2957842
End: 2958273
Strand: Direct
Name: fur1 [H]
Synonym: RSc2747
Alternate gene names: 17547466
Gene position: 2957842-2958273 (Clockwise)
Preceding gene: 17547457
Following gene: 17547480
Centisome position: 79.59
GC content: 61.57
Gene sequence:
>432_bases ATGCCGAGTCCTGCAGACCTCAAGAACATCGGTCTGAAAGCCACGGTGCCGCGGTTGAAGATTCTCGAAATCTTCCAGAC CAGCGAAGAGCGTCACATGAGCGCCGAAGACGTGTACCGCATCCTGCTCGCCGAGCACATGGATATCGGGCTGGCAACGG TCTACCGCGTGCTGACCCAGTTCGAGCAGGCCGGCCTGCTGTCACGCAACAATTTCGAGTCCGGCAAGGCCATCTACGAG CTCAACGAAGGCAAGCACCATGATCACCTGGTCTGCCTCGATTGCGGCCGCGTGGAGGAATTCTTCGACGGCGAGATCGA GCAGCGCCAGCAGAGCATCGCCCGCGCCCGCGGATTCGCGCTGCAGGAGCATGCCTTGTCGCTGTACGGCAATTGCACCA AGGAACCCTGCCCGCACCGGCCCAAGCGCTGA
Upstream 100 bases:
>100_bases GGCGACACTGGCGCGTCAAGCGCGCCCGTCGATAGGACTTTTGCCGCCAAAACCCTTATGATTGGAATATCTGAACATTG TACTCTAGGGAGCTAGGCGC
Downstream 100 bases:
>100_bases CGCAACAGCCGCCTCATCAAAAAAAACGGCCGCATCCACTGCGGCCGTTTTCGTTGGAGGAGCGCGGTGCTGGCATCAGA CGGACAGCCGCGACTCATCC
Product: ferric uptake transcriptional repressor transcription regulator protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPSPADLKNIGLKATVPRLKILEIFQTSEERHMSAEDVYRILLAEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIYE LNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFALQEHALSLYGNCTKEPCPHRPKR
Sequences:
>Translated_143_residues MPSPADLKNIGLKATVPRLKILEIFQTSEERHMSAEDVYRILLAEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIYE LNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFALQEHALSLYGNCTKEPCPHRPKR >Mature_142_residues PSPADLKNIGLKATVPRLKILEIFQTSEERHMSAEDVYRILLAEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIYEL NEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFALQEHALSLYGNCTKEPCPHRPKR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=54.9618320610687, Blast_Score=155, Evalue=1e-39,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16334; Mature: 16203
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPADLKNIGLKATVPRLKILEIFQTSEERHMSAEDVYRILLAEHMDIGLATVYRVLTQ CCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIYELNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCH LQEHALSLYGNCTKEPCPHRPKR HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PSPADLKNIGLKATVPRLKILEIFQTSEERHMSAEDVYRILLAEHMDIGLATVYRVLTQ CCCCCHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIYELNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCH LQEHALSLYGNCTKEPCPHRPKR HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA