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The map label for this gene is panD [H]

Identifier: 17547450

GI number: 17547450

Start: 2939400

End: 2939762

Strand: Direct

Name: panD [H]

Synonym: RSc2731

Alternate gene names: 17547450

Gene position: 2939400-2939762 (Clockwise)

Preceding gene: 17547449

Following gene: 17547451

Centisome position: 79.09

GC content: 61.98

Gene sequence:

>363_bases
ATGCAACGCAATATGCTCCGCGCCAAGCTGCACCGCGCGACGGTCACCCAGGCCGATCTGGACTACGAAGGCTCGTGCGG
CATCGACGAGGACCTGCTCGACGCCGCCGACATGCGCGAGTACGAAAAGATCGAGCTCTACAACGTCAACAACGGCGAGC
GCTTCTCGACCTACATCATCAAGGGCAAGCGCGGCTCGGGCGAAATCTCGCTCAACGGCGCCGCCGCGCGCCGCGCGCAC
GTGGGCGACAAACTGATCATCTGCACCTACGCGCCGATGAACGAGGAAGAAGTCGCCAACTACAAGCCCAAGATCGTGCT
GCTCGGCGACGGCAACCGGATCAAGGAAATCAAGGCAGTCTGA

Upstream 100 bases:

>100_bases
GCTCCCGCCGCCACGAGCACCGCCAAATAACCCAGGAGACCGCGGCAGGCGCAAGCCCTGCCGCGCGTGGCGATTTCATT
TCTGTTTCAAGGAAAGCTTC

Downstream 100 bases:

>100_bases
GCGCCGGCGGCGCGCCGCGCACCCCGGCCGCCGCCATCGGTACCGACCGGGACGTCATCAGGAGGAGCAACATGGAGCTG
GTCAATCACACGGTGATCAA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYIIKGKRGSGEISLNGAAARRAH
VGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV

Sequences:

>Translated_120_residues
MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYIIKGKRGSGEISLNGAAARRAH
VGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV
>Mature_120_residues
MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYIIKGKRGSGEISLNGAAARRAH
VGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=115, Percent_Identity=52.1739130434783, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 13448; Mature: 13448

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYII
CCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHCHHCCCCCCEEEEEECCCCCEEEEEEE
KGKRGSGEISLNGAAARRAHVGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV
ECCCCCCEEEECCCCCEECCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCEEEEECC
>Mature Secondary Structure
MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYII
CCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHCHHCCCCCCEEEEEECCCCCEEEEEEE
KGKRGSGEISLNGAAARRAHVGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV
ECCCCCCEEEECCCCCEECCCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA