Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is pntAa [H]
Identifier: 17547449
GI number: 17547449
Start: 2938190
End: 2939329
Strand: Direct
Name: pntAa [H]
Synonym: RSc2730
Alternate gene names: 17547449
Gene position: 2938190-2939329 (Clockwise)
Preceding gene: 17547446
Following gene: 17547450
Centisome position: 79.06
GC content: 71.84
Gene sequence:
>1140_bases ATGCACATCGGCATCCCGCGGGAAACGCGGGCGGACGAGACGCGCGTTGCCGCGACCCCGGAGACGGTGAAGAAATACGT GGCCCAGGGTCACCAGGTGACGGTGCAGTCGGGAGCCGGCGTGGCGGCGGCCCAGCCCGACGAGGCCTATGTGGCGGCCG GCGCCGGGATCGGCACCGCCGCCCAGGCGCTCGGCGCGCAGATCGTGCTCAAGGTGCGTTCGCCGGATGCCGCCGAACTC GCGCAGATGCAGCCGGGCGCCGTGCTGGTCGGCATGCTCAACCCGTTCGACGACGACAACACCGCGCGCCTGGCCGCCGC CAACCTCTCGGCCTTCGCGCTGGAGGCCGCGCCGCGCACCACGCGCGCGCAGAGCATGGACGTGCTCTCCTCGCAGGCCA ACATCGCCGGCTACAAGGCGGTGATGGTCGCCGCCAACCACTACCCGCGCTTCATGCCGATGCTGATGACCGCCGCCGGC ACCGTGAAGGCCGCGCGCGTGCTGGTGCTGGGCGCCGGCGTGGCGGGCCTGCAGGCGATCGCCACGGCCAAGCGGCTGGG CGCCGTGATCGAGGCCTCCGACGTGCGGCCCGCCGTGAAGGAGCAGATCGAATCGCTGGGCGCCAAATTCCTCGACGTGC CGCTGCTGACCGACGAAGAGCGCGAGATCGCCCAGGGCGTCGGCGGCTATGCCCGGCCGATGCCGCCCGACTGGATGCGC CGCCAGGCCGAGCTGGTGCACGAGCGTGCCAAGCAGGCCGACATCGTCATCACCACCGCGCTGATCCCCGGCCGCCGGGC GCCGACGCTGCTGCCGGAAGACACCGTGCGCGCCATGAAGCCCGGCTCGGTGGTGGTCGACCTGGCCGCCGCGCAGGGCG GCAACTGCCCGCTGACCGAAGCCGACCGCGTGGTCGTCAAGCATGGCGTCACGCTGGTCGGCCACACCAACCTGCCGGCG ATGGTGGCGGCGGACGCCTCCGCCCTCTACGCCCGCAATGTGCTGGACTTCCTCAAGCTGATCATCGACAAGGATGGCGG CCTCGCCATCAACCGCGCAGACGACATCGTGGCCGCCTGCCTGTTGTGCCAGGCCGGCCAGTTGGCGCGTGCTCCCGCCG CCACGAGCACCGCCAAATAA
Upstream 100 bases:
>100_bases CCTGCAGACAACTTCGGGTAAGCTGCACGTCGATCCCAACCGGGCCACGCCCCCGACCAGCCTGCCGCGCAGGCCGGCGC ACCACGACGAGGAGAACACG
Downstream 100 bases:
>100_bases CCCAGGAGACCGCGGCAGGCGCAAGCCCTGCCGCGCGTGGCGATTTCATTTCTGTTTCAAGGAAAGCTTCATGCAACGCA ATATGCTCCGCGCCAAGCTG
Product: NAD(P) transhydrogenase alpha subunit
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MHIGIPRETRADETRVAATPETVKKYVAQGHQVTVQSGAGVAAAQPDEAYVAAGAGIGTAAQALGAQIVLKVRSPDAAEL AQMQPGAVLVGMLNPFDDDNTARLAAANLSAFALEAAPRTTRAQSMDVLSSQANIAGYKAVMVAANHYPRFMPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPLLTDEEREIAQGVGGYARPMPPDWMR RQAELVHERAKQADIVITTALIPGRRAPTLLPEDTVRAMKPGSVVVDLAAAQGGNCPLTEADRVVVKHGVTLVGHTNLPA MVAADASALYARNVLDFLKLIIDKDGGLAINRADDIVAACLLCQAGQLARAPAATSTAK
Sequences:
>Translated_379_residues MHIGIPRETRADETRVAATPETVKKYVAQGHQVTVQSGAGVAAAQPDEAYVAAGAGIGTAAQALGAQIVLKVRSPDAAEL AQMQPGAVLVGMLNPFDDDNTARLAAANLSAFALEAAPRTTRAQSMDVLSSQANIAGYKAVMVAANHYPRFMPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPLLTDEEREIAQGVGGYARPMPPDWMR RQAELVHERAKQADIVITTALIPGRRAPTLLPEDTVRAMKPGSVVVDLAAAQGGNCPLTEADRVVVKHGVTLVGHTNLPA MVAADASALYARNVLDFLKLIIDKDGGLAINRADDIVAACLLCQAGQLARAPAATSTAK >Mature_379_residues MHIGIPRETRADETRVAATPETVKKYVAQGHQVTVQSGAGVAAAQPDEAYVAAGAGIGTAAQALGAQIVLKVRSPDAAEL AQMQPGAVLVGMLNPFDDDNTARLAAANLSAFALEAAPRTTRAQSMDVLSSQANIAGYKAVMVAANHYPRFMPMLMTAAG TVKAARVLVLGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPLLTDEEREIAQGVGGYARPMPPDWMR RQAELVHERAKQADIVITTALIPGRRAPTLLPEDTVRAMKPGSVVVDLAAAQGGNCPLTEADRVVVKHGVTLVGHTNLPA MVAADASALYARNVLDFLKLIIDKDGGLAINRADDIVAACLLCQAGQLARAPAATSTAK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=364, Percent_Identity=40.1098901098901, Blast_Score=258, Evalue=4e-69, Organism=Homo sapiens, GI122939153, Length=364, Percent_Identity=40.1098901098901, Blast_Score=258, Evalue=4e-69, Organism=Escherichia coli, GI1787887, Length=371, Percent_Identity=43.3962264150943, Blast_Score=296, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17550456, Length=371, Percent_Identity=42.0485175202156, Blast_Score=295, Evalue=4e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 39362; Mature: 39362
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIGIPRETRADETRVAATPETVKKYVAQGHQVTVQSGAGVAAAQPDEAYVAAGAGIGTA CCCCCCCCCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCEEEECCCCCHH AQALGAQIVLKVRSPDAAELAQMQPGAVLVGMLNPFDDDNTARLAAANLSAFALEAAPRT HHHCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHEEEECCCCC TRAQSMDVLSSQANIAGYKAVMVAANHYPRFMPMLMTAAGTVKAARVLVLGAGVAGLQAI HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPLLTDEEREIAQGVGGYARPMPPDWMR HHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEECCCCCCCHHHHHHCCCCCCCCCCHHHHH RQAELVHERAKQADIVITTALIPGRRAPTLLPEDTVRAMKPGSVVVDLAAAQGGNCPLTE HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCH ADRVVVKHGVTLVGHTNLPAMVAADASALYARNVLDFLKLIIDKDGGLAINRADDIVAAC HHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH LLCQAGQLARAPAATSTAK HHHCCCCHHCCCCCCCCCC >Mature Secondary Structure MHIGIPRETRADETRVAATPETVKKYVAQGHQVTVQSGAGVAAAQPDEAYVAAGAGIGTA CCCCCCCCCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCEEEECCCCCHH AQALGAQIVLKVRSPDAAELAQMQPGAVLVGMLNPFDDDNTARLAAANLSAFALEAAPRT HHHCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHEEEECCCCC TRAQSMDVLSSQANIAGYKAVMVAANHYPRFMPMLMTAAGTVKAARVLVLGAGVAGLQAI HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPLLTDEEREIAQGVGGYARPMPPDWMR HHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEECCCCCCCHHHHHHCCCCCCCCCCHHHHH RQAELVHERAKQADIVITTALIPGRRAPTLLPEDTVRAMKPGSVVVDLAAAQGGNCPLTE HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCH ADRVVVKHGVTLVGHTNLPAMVAADASALYARNVLDFLKLIIDKDGGLAINRADDIVAAC HHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH LLCQAGQLARAPAATSTAK HHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]