Definition | Ralstonia solanacearum GMI1000, complete genome. |
---|---|
Accession | NC_003295 |
Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is dgk [H]
Identifier: 17547348
GI number: 17547348
Start: 2831919
End: 2832563
Strand: Direct
Name: dgk [H]
Synonym: RSc2629
Alternate gene names: 17547348
Gene position: 2831919-2832563 (Clockwise)
Preceding gene: 17547347
Following gene: 17547349
Centisome position: 76.2
GC content: 68.06
Gene sequence:
>645_bases ATGGCACTCGATCATCTGCGCCGCATCGTCGTCGAAGGGCCGATCGGCGCCGGCAAGACGGCATTGGCGCAACGGCTGGC CGATCACCTGCGTGCGGCCACGCTGTTCGAAACCCCCGAAGACAACCCCTTTCTCGCGCGCTTCTATGAAGAGCCCGCGC GCTATGCGCTGCCGGTGCAGCTGCGCTTCCTGCTGCAGCGCGCGCAGCGGCTGGCCGCATGGCAGAAGGCCACGCTGGCC GGCGAGCGCATCGTCGCCGACAGCTTCCTGCCGCGCGACCGCCTGTTCGCCCAGCTGACGCTGCCCGCCGACGAGCTCGC GCTGTACGACGCCATGGCGCAAGCACTGGCCCTGCCGCCGCAGCGCATCGATCTCGTGGTCTGCCTGCAGGCGCGCGCCG AAGACCTGCTGCCCCGCATCGCCAGGCGCGCCGTTCCTTACGAAGCGGGCATCGACGCGGAATACCTCGAACGCATCTGC GCCGCGTACGGCGAGCTGTTTCTGTATTACGATGCCGCACCGACGCTGATCGTCGATACCGCCGCCTTCGATCCGGCCGG CAACGACGACGATTTCCGCACCTTGCTCACCCGCATCGACGCCATGCGCGGGCCCAAGGAATTCATCAAGCTCGCGACCC GGTAG
Upstream 100 bases:
>100_bases CGTCGCCGACCAGGTCATCGAGAAGATGACGCTGTGCCAGTGCATGCGCGCCAAGCCGGCCGCCTGACACCTCTTTTCCA CTCTCCCGAATCCAGACGCG
Downstream 100 bases:
>100_bases CAGGTCCATCGCATGGCCTGCCTGGAAGGTCGCGGCGCTCAACCTGATCCCAGTCCATGAGCAGCTATCTCCAGGAATCC ACCCGCAAGGCCGTGACCGT
Product: deoxyguanosine kinase (DGUO kinase) (DGK) protein
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQLRFLLQRAQRLAAWQKATLA GERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPPQRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERIC AAYGELFLYYDAAPTLIVDTAAFDPAGNDDDFRTLLTRIDAMRGPKEFIKLATR
Sequences:
>Translated_214_residues MALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQLRFLLQRAQRLAAWQKATLA GERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPPQRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERIC AAYGELFLYYDAAPTLIVDTAAFDPAGNDDDFRTLLTRIDAMRGPKEFIKLATR >Mature_213_residues ALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQLRFLLQRAQRLAAWQKATLAG ERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPPQRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERICA AYGELFLYYDAAPTLIVDTAAFDPAGNDDDFRTLLTRIDAMRGPKEFIKLATR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 23982; Mature: 23851
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQ CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHCCHHH LRFLLQRAQRLAAWQKATLAGERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPP HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHHHCCCH QRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERICAAYGELFLYYDAAPTLIVDT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEC AAFDPAGNDDDFRTLLTRIDAMRGPKEFIKLATR CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure ALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQ CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHCCHHH LRFLLQRAQRLAAWQKATLAGERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPP HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHHHCCCH QRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERICAAYGELFLYYDAAPTLIVDT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEC AAFDPAGNDDDFRTLLTRIDAMRGPKEFIKLATR CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]