Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is folK [H]
Identifier: 17547347
GI number: 17547347
Start: 2831376
End: 2831885
Strand: Direct
Name: folK [H]
Synonym: RSc2628
Alternate gene names: 17547347
Gene position: 2831376-2831885 (Clockwise)
Preceding gene: 17547346
Following gene: 17547348
Centisome position: 76.19
GC content: 68.24
Gene sequence:
>510_bases ATGACAGTGGCGTATATCGGCATCGGCGCCAACCTCGGCGACGCGCGCCAGGCCGTCAAAGACGCCGTGGTCTGCCTCGC GCAGCAGGTGGGCATCAGCATCACCGGCAAGTCCAGCCTGTACCGCAGTGCCCCGGTGGACGCCACCGGCGACGACTACA TCAATGCCGTGGTGCGCATCGATACGCACTTCACCGCCGGCCAGCTGCTGCGCATCTGCCACCATATCGAAGACCAGTTC GGCCGCGAACGCCCGTTCCGCAACGCACCGCGCACGCTGGACCTGGACCTGCTGCTGTACGGCGACCAGACCCTCACCTC GCCCGAGCTGACCGTGCCGCATCCGCGCGTCGGACAGCGTGCCTTTACCCTGCTGCCGCTGCACGAACTGGCGCCGGATC TCGTCATCCCCGGCATCGGCGCCGTGGCGGCACTGCTGCCGGGCGTCGCCGACCAGGTCATCGAGAAGATGACGCTGTGC CAGTGCATGCGCGCCAAGCCGGCCGCCTGA
Upstream 100 bases:
>100_bases CCGGGGGCGCCCCCGCGGGCGCCAAGCGCCGCCGCCGGCGTGGTCCGGCAAAATCGGATACAGTCGCCGACGTGAACCCG GGCAGTTCGGAGGGAACGTG
Downstream 100 bases:
>100_bases CACCTCTTTTCCACTCTCCCGAATCCAGACGCGATGGCACTCGATCATCTGCGCCGCATCGTCGTCGAAGGGCCGATCGG CGCCGGCAAGACGGCATTGG
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTVAYIGIGANLGDARQAVKDAVVCLAQQVGISITGKSSLYRSAPVDATGDDYINAVVRIDTHFTAGQLLRICHHIEDQF GRERPFRNAPRTLDLDLLLYGDQTLTSPELTVPHPRVGQRAFTLLPLHELAPDLVIPGIGAVAALLPGVADQVIEKMTLC QCMRAKPAA
Sequences:
>Translated_169_residues MTVAYIGIGANLGDARQAVKDAVVCLAQQVGISITGKSSLYRSAPVDATGDDYINAVVRIDTHFTAGQLLRICHHIEDQF GRERPFRNAPRTLDLDLLLYGDQTLTSPELTVPHPRVGQRAFTLLPLHELAPDLVIPGIGAVAALLPGVADQVIEKMTLC QCMRAKPAA >Mature_168_residues TVAYIGIGANLGDARQAVKDAVVCLAQQVGISITGKSSLYRSAPVDATGDDYINAVVRIDTHFTAGQLLRICHHIEDQFG RERPFRNAPRTLDLDLLLYGDQTLTSPELTVPHPRVGQRAFTLLPLHELAPDLVIPGIGAVAALLPGVADQVIEKMTLCQ CMRAKPAA
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=139, Percent_Identity=42.4460431654676, Blast_Score=102, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324073, Length=136, Percent_Identity=33.0882352941176, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18179; Mature: 18048
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAYIGIGANLGDARQAVKDAVVCLAQQVGISITGKSSLYRSAPVDATGDDYINAVVRI CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHCCCCCCCCCHHHEEEEEEE DTHFTAGQLLRICHHIEDQFGRERPFRNAPRTLDLDLLLYGDQTLTSPELTVPHPRVGQR CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCH AFTLLPLHELAPDLVIPGIGAVAALLPGVADQVIEKMTLCQCMRAKPAA HHHEEEHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVAYIGIGANLGDARQAVKDAVVCLAQQVGISITGKSSLYRSAPVDATGDDYINAVVRI EEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEECCCHHHCCCCCCCCCHHHEEEEEEE DTHFTAGQLLRICHHIEDQFGRERPFRNAPRTLDLDLLLYGDQTLTSPELTVPHPRVGQR CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCH AFTLLPLHELAPDLVIPGIGAVAALLPGVADQVIEKMTLCQCMRAKPAA HHHEEEHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168622 [H]