The gene/protein map for NC_003295 is currently unavailable.
Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yahD [C]

Identifier: 17546507

GI number: 17546507

Start: 1922865

End: 1923740

Strand: Direct

Name: yahD [C]

Synonym: RSc1788

Alternate gene names: 17546507

Gene position: 1922865-1923740 (Clockwise)

Preceding gene: 17546506

Following gene: 17546509

Centisome position: 51.74

GC content: 70.21

Gene sequence:

>876_bases
ATGCGATACCGAGATAACCTCAAGCGGAGCCTGAAGCAGGCCGCGCTGGCGGCCGGGCTGCTGATGACGATGTCGTGCGC
CGTCCGCGCCACGCCGCAGGACGACCTGCGCTCCGCGGTCGAATACAACCGGCCGGCGCTGGTGCAGAAGCTCGTCGCAC
AGGGTGTCGACCCGAACCTGGACACGCGCGACGGCACGCCGCTGCTGGTGGATGCGCTCAAGGACAAGAACATCGACGTG
GCCGAGGCGCTGATCCGCGCCAAGGGGCTCGACTTCGAGCGCGCCAACGCCGCCGGCGAGAACGCGCTGATGATGGCCGC
CTACCAGGGCCTGCTGCCGCTGGTCCGGCTGATGGTCGAGACCTACGACGTGGAGGTCAACAAGACCGGCTGGACCGCGC
TGCACTATGCCGCCACCAACGGCCATGACGCCATCGTCCAGTACCTGCTCGACCATGGGGCCTATATCGACGCCGAAAGC
CCGAACGGCACCACGCCGCTGATGATGGCGACCATGGGCGGGCAGATCACCACCGTCAAGCTGCTGCTGGACGAAGGCGC
GGACATGAACCTGCGCAACCAGCAGAAGATGGACGTGATCGACTTCGCCAAGCGCTACCACCAGGACGAGATCGCCGCCG
GGCTGGAGTCGCGCCGGCGCAAGCTGGCCGAGCCGGGCGCGCAGCCGGTGCCCGCGCGGCAGCCGGCGGCGCCTGCGGGG
ATGCGGCCCGCCGCGCCCGTGGTGCCGGACGTGCCCGCGCCGATGCCGGCGCCACGCGCACCCGAGTCCGCCATCGACCG
CGATGCCACCAGCGGCCTGCCGGGCTCGCTGTCGGACCAGAAGACGGTTCCGCCGCCGGACCTGCGCGGCAATTGA

Upstream 100 bases:

>100_bases
GCCTACGTGCGGCACGTGGGCGAATGCCTCGCCACGCTGCGCGGCGAGCCGCTGGAGCACATCGCCAGCGCGACAACCGA
GAATTTCTTCCGTCTATTCA

Downstream 100 bases:

>100_bases
GGCCGGATGCGCGGCGGCGCGGCGCGCCGGCCACTCAGGCCACTCAGGCCGCTCAGGCCGCCCGCGCCAGCCGCACCCCG
GTGAACTGCCACCGCTGGTG

Product: aankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRYRDNLKRSLKQAALAAGLLMTMSCAVRATPQDDLRSAVEYNRPALVQKLVAQGVDPNLDTRDGTPLLVDALKDKNIDV
AEALIRAKGLDFERANAAGENALMMAAYQGLLPLVRLMVETYDVEVNKTGWTALHYAATNGHDAIVQYLLDHGAYIDAES
PNGTTPLMMATMGGQITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEPGAQPVPARQPAAPAG
MRPAAPVVPDVPAPMPAPRAPESAIDRDATSGLPGSLSDQKTVPPPDLRGN

Sequences:

>Translated_291_residues
MRYRDNLKRSLKQAALAAGLLMTMSCAVRATPQDDLRSAVEYNRPALVQKLVAQGVDPNLDTRDGTPLLVDALKDKNIDV
AEALIRAKGLDFERANAAGENALMMAAYQGLLPLVRLMVETYDVEVNKTGWTALHYAATNGHDAIVQYLLDHGAYIDAES
PNGTTPLMMATMGGQITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEPGAQPVPARQPAAPAG
MRPAAPVVPDVPAPMPAPRAPESAIDRDATSGLPGSLSDQKTVPPPDLRGN
>Mature_291_residues
MRYRDNLKRSLKQAALAAGLLMTMSCAVRATPQDDLRSAVEYNRPALVQKLVAQGVDPNLDTRDGTPLLVDALKDKNIDV
AEALIRAKGLDFERANAAGENALMMAAYQGLLPLVRLMVETYDVEVNKTGWTALHYAATNGHDAIVQYLLDHGAYIDAES
PNGTTPLMMATMGGQITTVKLLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEPGAQPVPARQPAAPAG
MRPAAPVVPDVPAPMPAPRAPESAIDRDATSGLPGSLSDQKTVPPPDLRGN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI148596917, Length=184, Percent_Identity=32.0652173913043, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI62988328, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI268607595, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI37620163, Length=151, Percent_Identity=35.0993377483444, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI46519147, Length=151, Percent_Identity=35.0993377483444, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI46519154, Length=151, Percent_Identity=35.0993377483444, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI46519151, Length=151, Percent_Identity=35.0993377483444, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI71274109, Length=173, Percent_Identity=32.3699421965318, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI55741641, Length=171, Percent_Identity=30.9941520467836, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI110431370, Length=155, Percent_Identity=30.9677419354839, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI56550047, Length=188, Percent_Identity=30.8510638297872, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI225543461, Length=179, Percent_Identity=29.0502793296089, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI70780355, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI215598574, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI38683816, Length=151, Percent_Identity=33.112582781457, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI70780357, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI70780353, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI38683807, Length=151, Percent_Identity=33.112582781457, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI70780359, Length=157, Percent_Identity=31.8471337579618, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI225543463, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI59850762, Length=165, Percent_Identity=33.9393939393939, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI55770876, Length=219, Percent_Identity=30.5936073059361, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI41055989, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI187608777, Length=178, Percent_Identity=32.0224719101124, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI38569428, Length=137, Percent_Identity=35.036496350365, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI38569426, Length=137, Percent_Identity=35.036496350365, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI224465233, Length=162, Percent_Identity=29.0123456790123, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI157504499, Length=164, Percent_Identity=31.0975609756098, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI58331113, Length=164, Percent_Identity=31.0975609756098, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI58331111, Length=164, Percent_Identity=31.0975609756098, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI188595682, Length=133, Percent_Identity=36.0902255639098, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI30425444, Length=162, Percent_Identity=32.0987654320988, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI256574792, Length=120, Percent_Identity=34.1666666666667, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI38176283, Length=153, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI52426737, Length=129, Percent_Identity=36.4341085271318, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI30089994, Length=153, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI70995267, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI67906195, Length=95, Percent_Identity=41.0526315789474, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI24233530, Length=148, Percent_Identity=33.7837837837838, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI163914396, Length=176, Percent_Identity=28.4090909090909, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809478, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809476, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809474, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI16975496, Length=152, Percent_Identity=30.2631578947368, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809472, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809470, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224809468, Length=157, Percent_Identity=30.5732484076433, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI155969701, Length=158, Percent_Identity=32.9113924050633, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI68131557, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI157743284, Length=172, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI304361760, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI304361757, Length=125, Percent_Identity=35.2, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI7705748, Length=180, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI41327754, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI30348954, Length=185, Percent_Identity=30.2702702702703, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI157739945, Length=139, Percent_Identity=33.0935251798561, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI18252778, Length=215, Percent_Identity=27.4418604651163, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI255982572, Length=124, Percent_Identity=34.6774193548387, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI212646031, Length=171, Percent_Identity=33.9181286549708, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646033, Length=171, Percent_Identity=33.9181286549708, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646035, Length=171, Percent_Identity=33.9181286549708, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17542700, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71981389, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25145251, Length=155, Percent_Identity=31.6129032258064, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71981414, Length=155, Percent_Identity=31.6129032258064, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193206533, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193206531, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281359521, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI281359519, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28558752, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28558750, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28558756, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28558754, Length=186, Percent_Identity=33.8709677419355, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI161078304, Length=210, Percent_Identity=29.0476190476191, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571867, Length=190, Percent_Identity=31.0526315789474, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571865, Length=190, Percent_Identity=31.0526315789474, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45551135, Length=141, Percent_Identity=32.6241134751773, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281363919, Length=141, Percent_Identity=32.6241134751773, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330476, Length=141, Percent_Identity=32.6241134751773, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550479, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330480, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573593, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082085, Length=155, Percent_Identity=31.6129032258064, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330482, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082099, Length=155, Percent_Identity=31.6129032258064, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330474, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330478, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082089, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161082092, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI20129611, Length=154, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082110, Length=191, Percent_Identity=31.413612565445, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082096, Length=191, Percent_Identity=31.413612565445, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082081, Length=191, Percent_Identity=31.413612565445, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082106, Length=191, Percent_Identity=31.413612565445, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45550629, Length=181, Percent_Identity=32.0441988950276, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552223, Length=164, Percent_Identity=32.3170731707317, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221472807, Length=164, Percent_Identity=32.3170731707317, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17998549, Length=164, Percent_Identity=32.3170731707317, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 31351; Mature: 31351

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MRYRDNLKRSLKQAALAAGLLMTMSCAVRATPQDDLRSAVEYNRPALVQKLVAQGVDPNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
DTRDGTPLLVDALKDKNIDVAEALIRAKGLDFERANAAGENALMMAAYQGLLPLVRLMVE
CCCCCCCHHHEHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TYDVEVNKTGWTALHYAATNGHDAIVQYLLDHGAYIDAESPNGTTPLMMATMGGQITTVK
HHCCEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCEEEEE
LLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEPGAQPVPARQPAAPAG
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MRPAAPVVPDVPAPMPAPRAPESAIDRDATSGLPGSLSDQKTVPPPDLRGN
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRYRDNLKRSLKQAALAAGLLMTMSCAVRATPQDDLRSAVEYNRPALVQKLVAQGVDPNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
DTRDGTPLLVDALKDKNIDVAEALIRAKGLDFERANAAGENALMMAAYQGLLPLVRLMVE
CCCCCCCHHHEHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TYDVEVNKTGWTALHYAATNGHDAIVQYLLDHGAYIDAESPNGTTPLMMATMGGQITTVK
HHCCEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCEEEEE
LLLDEGADMNLRNQQKMDVIDFAKRYHQDEIAAGLESRRRKLAEPGAQPVPARQPAAPAG
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MRPAAPVVPDVPAPMPAPRAPESAIDRDATSGLPGSLSDQKTVPPPDLRGN
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA