Click here to switch to the map view.

The map label for this gene is 17546343

Identifier: 17546343

GI number: 17546343

Start: 1744730

End: 1745491

Strand: Direct

Name: 17546343

Synonym: RSc1624

Alternate gene names: NA

Gene position: 1744730-1745491 (Clockwise)

Preceding gene: 17546340

Following gene: 17546344

Centisome position: 46.95

GC content: 68.77

Gene sequence:

>762_bases
ATGCTCCTGTCTTTTGCCCGTCGTTGCGCCCGTGTGTGCTGCGTGATGCGCCGTGTTTTCCATGTGTCCCATGCGGTTCC
GCTGGCGGCTGTGCTGTGCGCGGCGCCGGCGTGGAGCCAGCCGGCGGCATCCGCGCCGGTCTCGTCCGCATCGTCGGCCG
ATACGCCGCCTGATTTCGGCCCGGAGCACGACCGCATCAGCAGCGCCCGCGCGTGGGCCGAATACCGCTATGAGCAGGCC
GAGCGCGCCTGCTACGACACCTTCTTCGTCACGCACTGCATCGACAAGGCCAAGGATGTGCGCCGCACGGAACTCCATGC
CATCCGCGAGCGCGAGCTGGCGCTGGACGAGGCCGAGCGCGCCGACCGCGCCGAGCGCCGCGATCGCGATCGTGCCGTCC
GCCAGGCGCAGTACGAGGCCGAGCGCCCGCAGCGCGAGGCCAGCGAACAGAAGAACCGCGGCGATTTCGAGCAGAAGCAG
GAACAGCAGCGCCTGAACGAAGCGCAGCGCCAGGCCGAAGCGCCGCAGCGCGCCGCCAATGCCCAGGCCCATGCCCAGAA
GCAGTCCGACTACGACGCCAGGCTGAAGGCCGCGCAGGCGCAGGGGGCCGCCAACGCGGCTAAGCGCGCCGAGAACGCGA
AGCTGTATCAACAGAAGCAGCAGGATGCCCAGCAGCGCCAGAAGGAGCTGGAAGAGCGCCGCGAGCAGAGCAAGCGCCGC
AACGAGCAAAACAAGAGCAACACCAGCCCGCTGGGGTTCTAA

Upstream 100 bases:

>100_bases
GGCGCGCATTTTGCCATAACGCGCGGTCCACTCCGGACGGCATCCCGCCGCGGCATGGCGTGGGCTGCACAGGCGCGGTG
ATAAAATGCGCGGTATGCCT

Downstream 100 bases:

>100_bases
ACTTGACCTTGGCTTTAGGCGGGTGATTTCGGGAGGATGGATGGATAGCGACCTGAACACGATCTCGCGTCGCATCATCG
AGCTGCAGATCGAGCACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLLSFARRCARVCCVMRRVFHVSHAVPLAAVLCAAPAWSQPAASAPVSSASSADTPPDFGPEHDRISSARAWAEYRYEQA
ERACYDTFFVTHCIDKAKDVRRTELHAIRERELALDEAERADRAERRDRDRAVRQAQYEAERPQREASEQKNRGDFEQKQ
EQQRLNEAQRQAEAPQRAANAQAHAQKQSDYDARLKAAQAQGAANAAKRAENAKLYQQKQQDAQQRQKELEERREQSKRR
NEQNKSNTSPLGF

Sequences:

>Translated_253_residues
MLLSFARRCARVCCVMRRVFHVSHAVPLAAVLCAAPAWSQPAASAPVSSASSADTPPDFGPEHDRISSARAWAEYRYEQA
ERACYDTFFVTHCIDKAKDVRRTELHAIRERELALDEAERADRAERRDRDRAVRQAQYEAERPQREASEQKNRGDFEQKQ
EQQRLNEAQRQAEAPQRAANAQAHAQKQSDYDARLKAAQAQGAANAAKRAENAKLYQQKQQDAQQRQKELEERREQSKRR
NEQNKSNTSPLGF
>Mature_253_residues
MLLSFARRCARVCCVMRRVFHVSHAVPLAAVLCAAPAWSQPAASAPVSSASSADTPPDFGPEHDRISSARAWAEYRYEQA
ERACYDTFFVTHCIDKAKDVRRTELHAIRERELALDEAERADRAERRDRDRAVRQAQYEAERPQREASEQKNRGDFEQKQ
EQQRLNEAQRQAEAPQRAANAQAHAQKQSDYDARLKAAQAQGAANAAKRAENAKLYQQKQQDAQQRQKELEERREQSKRR
NEQNKSNTSPLGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28919; Mature: 28919

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSFARRCARVCCVMRRVFHVSHAVPLAAVLCAAPAWSQPAASAPVSSASSADTPPDFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PEHDRISSARAWAEYRYEQAERACYDTFFVTHCIDKAKDVRRTELHAIRERELALDEAER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRAERRDRDRAVRQAQYEAERPQREASEQKNRGDFEQKQEQQRLNEAQRQAEAPQRAAN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQAHAQKQSDYDARLKAAQAQGAANAAKRAENAKLYQQKQQDAQQRQKELEERREQSKRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQNKSNTSPLGF
HHHHCCCCCCCCC
>Mature Secondary Structure
MLLSFARRCARVCCVMRRVFHVSHAVPLAAVLCAAPAWSQPAASAPVSSASSADTPPDFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PEHDRISSARAWAEYRYEQAERACYDTFFVTHCIDKAKDVRRTELHAIRERELALDEAER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRAERRDRDRAVRQAQYEAERPQREASEQKNRGDFEQKQEQQRLNEAQRQAEAPQRAAN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQAHAQKQSDYDARLKAAQAQGAANAAKRAENAKLYQQKQQDAQQRQKELEERREQSKRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQNKSNTSPLGF
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA