Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17546344
Identifier: 17546344
GI number: 17546344
Start: 1745532
End: 1745735
Strand: Direct
Name: 17546344
Synonym: RSc1625
Alternate gene names: NA
Gene position: 1745532-1745735 (Clockwise)
Preceding gene: 17546343
Following gene: 17546345
Centisome position: 46.97
GC content: 58.33
Gene sequence:
>204_bases ATGGATAGCGACCTGAACACGATCTCGCGTCGCATCATCGAGCTGCAGATCGAGCACCGCGATCTCGATTTTCTGATCGA CCGGCTCTCGGCCGAGCCCGACCACGATGAACTGCAGTTGCGCCGTCTGAAAAAACGCCGTCTCAAGCTCAAGGACACCA TTACGCTGCTACAGTTGCAGCTTGAGCCGGACGTGCCCGCCTGA
Upstream 100 bases:
>100_bases GAGCAGAGCAAGCGCCGCAACGAGCAAAACAAGAGCAACACCAGCCCGCTGGGGTTCTAAACTTGACCTTGGCTTTAGGC GGGTGATTTCGGGAGGATGG
Downstream 100 bases:
>100_bases GCGTTGCCCCGATCGCCCGATCCTGGGACGCCGCCGCCACGTGCGGCGTCCGCCATCCGCCCTCCAGGACGCTTCTTCCT TGACTTCGCTTTCCCCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MDSDLNTISRRIIELQIEHRDLDFLIDRLSAEPDHDELQLRRLKKRRLKLKDTITLLQLQLEPDVPA
Sequences:
>Translated_67_residues MDSDLNTISRRIIELQIEHRDLDFLIDRLSAEPDHDELQLRRLKKRRLKLKDTITLLQLQLEPDVPA >Mature_67_residues MDSDLNTISRRIIELQIEHRDLDFLIDRLSAEPDHDELQLRRLKKRRLKLKDTITLLQLQLEPDVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8001; Mature: 8001
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDLNTISRRIIELQIEHRDLDFLIDRLSAEPDHDELQLRRLKKRRLKLKDTITLLQLQ CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHEEEEEEE LEPDVPA ECCCCCC >Mature Secondary Structure MDSDLNTISRRIIELQIEHRDLDFLIDRLSAEPDHDELQLRRLKKRRLKLKDTITLLQLQ CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHEEEEEEE LEPDVPA ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA