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The map label for this gene is yphB [H]

Identifier: 17545802

GI number: 17545802

Start: 1141243

End: 1142214

Strand: Direct

Name: yphB [H]

Synonym: RSc1083

Alternate gene names: 17545802

Gene position: 1141243-1142214 (Clockwise)

Preceding gene: 17545801

Following gene: 17545811

Centisome position: 30.71

GC content: 73.46

Gene sequence:

>972_bases
ATGAATGCATCCCTTTCCGGTGCCGCGGAACGCTCCGCGCCGGCCGGCAGATGGCTGGCGCCGGGTCCGGTGCACACCCT
GCGCGCCGGCACGCTCACGATGGACATCGCCCCCGCCGCGGGCGGGCGCATCGCCGCACTGGCCTCGGTCGATGCCGACG
GCCGCCGCACGGACTGGCTGGCTCCGATGCCCGCGTCCTGCCTGCGCGACGGCTTCGACGGGCTGGCCTGGCCCAAGGCG
GGCTGCTATCCGCTGCTGCCGTTCTCGAACCGCATCCGCGGCGGCCGTTTCCAATGGGCGGGCCGCGAGGTCTGCCTGGC
GCCGCATCCGGGGCAGGCCCATGCGATGCACGGGGTCGCGCATGCACGGGCGTGGCAGGTCGATGCACTGAGCGCGTCAT
CGGCCGAGCTCAGCCTGCGCTACGTGCCGGTGGCGGAGGGCTGGCCGTGGCCGTTCGTCGCCACGCAGCGGCTCGCGCTG
ACGCCGGAAGGGCTGCACGCGGAGATGAGCCTGCGCAACGCAGGCGACACGCCGATGCCGGCGGGCGGCGGCTTCCATCC
GTACTTCGCGCGCACGCCGGGCATGCGCGTACGCTTCGAGGCCGAGACGGTGTGGCCGATGGATGCGGACGAGGTGGCCA
CGGGGCGCCGTCCGGTCGGCGAGCGCGAAGCGTTTGGCGATGCGCGCCCGCTGCCTGAGGACAGCTTCAGCGTCTACTAC
AGCGGCTGGCGGCAACTGGCCGAAGTGCGGCATGCGAGCGGAGCGGTGCTGACGCTGCGCGCGGACGATCCGCTCGACCA
TTGCATCCTGCATGCGCCAGGCGGCGCCGGCTACTTCTGCCTCGAACCGGTGTCGCACGTGGCCGACGCGATCAACCTGT
CGGCCCAGGGCTGGGACGGCACGGGGTTGCGCGTGCTGGCGCCGGGGGCGGCGCTGCATCTGCGCATGCGGCTGCTGCTG
GCGCCGGCGTAG

Upstream 100 bases:

>100_bases
GAGCACCGGTCACCAGTTCGTGGGCATGGTGGGTATCCGCCATCTGTTCTGAGCCGGCTGCGATGCTGGAGGCGCGGCGG
CTTCAATGCGGGTTGAGCCG

Downstream 100 bases:

>100_bases
CGCTCGCGCGGGCGGCGCCGTTTTCTTGCGCGCCGCCCGATCCTGCCGAGGTTCCGCATTGCCCCGCGGCGCGGTGGCCG
GGGCGGTCAGAAGACGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNASLSGAAERSAPAGRWLAPGPVHTLRAGTLTMDIAPAAGGRIAALASVDADGRRTDWLAPMPASCLRDGFDGLAWPKA
GCYPLLPFSNRIRGGRFQWAGREVCLAPHPGQAHAMHGVAHARAWQVDALSASSAELSLRYVPVAEGWPWPFVATQRLAL
TPEGLHAEMSLRNAGDTPMPAGGGFHPYFARTPGMRVRFEAETVWPMDADEVATGRRPVGEREAFGDARPLPEDSFSVYY
SGWRQLAEVRHASGAVLTLRADDPLDHCILHAPGGAGYFCLEPVSHVADAINLSAQGWDGTGLRVLAPGAALHLRMRLLL
APA

Sequences:

>Translated_323_residues
MNASLSGAAERSAPAGRWLAPGPVHTLRAGTLTMDIAPAAGGRIAALASVDADGRRTDWLAPMPASCLRDGFDGLAWPKA
GCYPLLPFSNRIRGGRFQWAGREVCLAPHPGQAHAMHGVAHARAWQVDALSASSAELSLRYVPVAEGWPWPFVATQRLAL
TPEGLHAEMSLRNAGDTPMPAGGGFHPYFARTPGMRVRFEAETVWPMDADEVATGRRPVGEREAFGDARPLPEDSFSVYY
SGWRQLAEVRHASGAVLTLRADDPLDHCILHAPGGAGYFCLEPVSHVADAINLSAQGWDGTGLRVLAPGAALHLRMRLLL
APA
>Mature_323_residues
MNASLSGAAERSAPAGRWLAPGPVHTLRAGTLTMDIAPAAGGRIAALASVDADGRRTDWLAPMPASCLRDGFDGLAWPKA
GCYPLLPFSNRIRGGRFQWAGREVCLAPHPGQAHAMHGVAHARAWQVDALSASSAELSLRYVPVAEGWPWPFVATQRLAL
TPEGLHAEMSLRNAGDTPMPAGGGFHPYFARTPGMRVRFEAETVWPMDADEVATGRRPVGEREAFGDARPLPEDSFSVYY
SGWRQLAEVRHASGAVLTLRADDPLDHCILHAPGGAGYFCLEPVSHVADAINLSAQGWDGTGLRVLAPGAALHLRMRLLL
APA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=306, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 34439; Mature: 34439

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASLSGAAERSAPAGRWLAPGPVHTLRAGTLTMDIAPAAGGRIAALASVDADGRRTDWL
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCCC
APMPASCLRDGFDGLAWPKAGCYPLLPFSNRIRGGRFQWAGREVCLAPHPGQAHAMHGVA
CCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHH
HARAWQVDALSASSAELSLRYVPVAEGWPWPFVATQRLALTPEGLHAEMSLRNAGDTPMP
HHHEEEEEECCCCCCEEEEEEEEECCCCCCCHHHCCEEEECCCCCEEEEEECCCCCCCCC
AGGGFHPYFARTPGMRVRFEAETVWPMDADEVATGRRPVGEREAFGDARPLPEDSFSVYY
CCCCCCCHHCCCCCCEEEEECCEECCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHH
SGWRQLAEVRHASGAVLTLRADDPLDHCILHAPGGAGYFCLEPVSHVADAINLSAQGWDG
HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEECHHHHHHHHHCCCCCCCCC
TGLRVLAPGAALHLRMRLLLAPA
CCEEEEECCHHHEEEEEEEECCC
>Mature Secondary Structure
MNASLSGAAERSAPAGRWLAPGPVHTLRAGTLTMDIAPAAGGRIAALASVDADGRRTDWL
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCCC
APMPASCLRDGFDGLAWPKAGCYPLLPFSNRIRGGRFQWAGREVCLAPHPGQAHAMHGVA
CCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHH
HARAWQVDALSASSAELSLRYVPVAEGWPWPFVATQRLALTPEGLHAEMSLRNAGDTPMP
HHHEEEEEECCCCCCEEEEEEEEECCCCCCCHHHCCEEEECCCCCEEEEEECCCCCCCCC
AGGGFHPYFARTPGMRVRFEAETVWPMDADEVATGRRPVGEREAFGDARPLPEDSFSVYY
CCCCCCCHHCCCCCCEEEEECCEECCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHH
SGWRQLAEVRHASGAVLTLRADDPLDHCILHAPGGAGYFCLEPVSHVADAINLSAQGWDG
HHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEECHHHHHHHHHCCCCCCCCC
TGLRVLAPGAALHLRMRLLLAPA
CCEEEEECCHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]