Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is pncB [H]
Identifier: 17545750
GI number: 17545750
Start: 1083178
End: 1084392
Strand: Direct
Name: pncB [H]
Synonym: RSc1031
Alternate gene names: 17545750
Gene position: 1083178-1084392 (Clockwise)
Preceding gene: 17545745
Following gene: 17545751
Centisome position: 29.15
GC content: 64.69
Gene sequence:
>1215_bases ATGACGACCATCCCGCGCGCAGGCGCCCCGCTTCCGGCCGTCCCGATGATCATCCGCTCGCTGCTCGACACCGATCTGTA CAAGTTCACCATGATGCAGGTGGTGTTGCATCACTTTCCCGGTGCGCACGTCGAATACCGCTTCAAGTGCCGCAACCCGG GCGTCGACCTGGTGCCGTACATCGAGGCGATCCGCGCGGAGATCCGCCACCTGTGCTCGCTGCGCTTCACCGAGGCGGAA CTGGACTACCTGCGCGGGCTGCGCTTCATCAAGAGCGATTTCGTCGATTTTCTCGACCTGTTCCATCTCAGCGAGAAGTA CATCGATATCCGCCCGGCGGCCTCCAACGACGGCCAGATCGACATCGTCATCAGCGGGCCGTGGCTGCACACCATCATGT TCGAGGTGCCGGTGCTGGCCATCGTCAACGAGGTGTACTTCAGCCGCACCCAGGCCCACCCGCAGTGGGACGAGGGCAAG CGCCGCCTGACCGAGAAGCTCGCCTCGCTCACGCGCCCGGGCCTGGAGGACTGCCGCATCGCCGATTACGGCACGCGCCG CCGCTTCTCCCACACCTGGCACGAGCACGTGCTGATGGAGGCGCGCAGCCAGCTTGGCAGCCAGTACGCCGGCACCAGCA ACGTCTACTTCGCCATGAAGCACAACATGACGCCGCTGGGCACCATGGCGCACGAGTACCTGCAGGCGTGCCAGTCGCTG GGCCCGCGCCTGCGCGATTCACAGGTCTTCGCGCTGGAGACCTGGGCCCGGGAATACCGTGGCGACCTGGGCATCGCGTT GTCCGACACCTACGGATTCGACGCCTTCCTGCGCGACTTCGACATGTTTTTCTGCAAGCTCTTCGATGGCGTGCGGCACG ATTCCGGTGATCCGTTCGAGTGGGGCGAGCGCATGCTCAAGCACTACGAGGGCATGCGCGTCGACCCGCAATCCAAGGCG CTGATCTTCTCCGACAGCCTGGACATGCCCAAGGTGGTGCGCCTGTACGAGCGCTTCCGCAGCCGCTGCAAGCTGGCCTT CGGCGTCGGCACCAACCTGACCAACGACCTCGGCTACACGCCGCTGCAGATCGTCATCAAGATGGTCCGCTGCAACGGCC AGCCGGTCGCCAAGCTGTCGGATGCGCCCGAGAAGACCATGTGCGACGACCCGGCCTACCTGGCCTACCTGAAGCAGGTG TTCGGCGTGCAATGA
Upstream 100 bases:
>100_bases GCGGAATCAAGGCCTTTTCCGGCCAGCAGGGCGGTCGAGGCCGGTGTTTTCACAGAGATTGACGGAAGTGGTCCCGACGG CCCGCGAGGCTTCGGTTAGC
Downstream 100 bases:
>100_bases GGCTCATGCGGGTGTCGAATACCTTTCAGCAGCCGGGCGCGCGATACCCGCGCGGCCGGCTCGTATAATCGACCGATTCC ACGCAAGCCGCCCGGACATG
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTTIPRAGAPLPAVPMIIRSLLDTDLYKFTMMQVVLHHFPGAHVEYRFKCRNPGVDLVPYIEAIRAEIRHLCSLRFTEAE LDYLRGLRFIKSDFVDFLDLFHLSEKYIDIRPAASNDGQIDIVISGPWLHTIMFEVPVLAIVNEVYFSRTQAHPQWDEGK RRLTEKLASLTRPGLEDCRIADYGTRRRFSHTWHEHVLMEARSQLGSQYAGTSNVYFAMKHNMTPLGTMAHEYLQACQSL GPRLRDSQVFALETWAREYRGDLGIALSDTYGFDAFLRDFDMFFCKLFDGVRHDSGDPFEWGERMLKHYEGMRVDPQSKA LIFSDSLDMPKVVRLYERFRSRCKLAFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDAPEKTMCDDPAYLAYLKQV FGVQ
Sequences:
>Translated_404_residues MTTIPRAGAPLPAVPMIIRSLLDTDLYKFTMMQVVLHHFPGAHVEYRFKCRNPGVDLVPYIEAIRAEIRHLCSLRFTEAE LDYLRGLRFIKSDFVDFLDLFHLSEKYIDIRPAASNDGQIDIVISGPWLHTIMFEVPVLAIVNEVYFSRTQAHPQWDEGK RRLTEKLASLTRPGLEDCRIADYGTRRRFSHTWHEHVLMEARSQLGSQYAGTSNVYFAMKHNMTPLGTMAHEYLQACQSL GPRLRDSQVFALETWAREYRGDLGIALSDTYGFDAFLRDFDMFFCKLFDGVRHDSGDPFEWGERMLKHYEGMRVDPQSKA LIFSDSLDMPKVVRLYERFRSRCKLAFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDAPEKTMCDDPAYLAYLKQV FGVQ >Mature_403_residues TTIPRAGAPLPAVPMIIRSLLDTDLYKFTMMQVVLHHFPGAHVEYRFKCRNPGVDLVPYIEAIRAEIRHLCSLRFTEAEL DYLRGLRFIKSDFVDFLDLFHLSEKYIDIRPAASNDGQIDIVISGPWLHTIMFEVPVLAIVNEVYFSRTQAHPQWDEGKR RLTEKLASLTRPGLEDCRIADYGTRRRFSHTWHEHVLMEARSQLGSQYAGTSNVYFAMKHNMTPLGTMAHEYLQACQSLG PRLRDSQVFALETWAREYRGDLGIALSDTYGFDAFLRDFDMFFCKLFDGVRHDSGDPFEWGERMLKHYEGMRVDPQSKAL IFSDSLDMPKVVRLYERFRSRCKLAFGVGTNLTNDLGYTPLQIVIKMVRCNGQPVAKLSDAPEKTMCDDPAYLAYLKQVF GVQ
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=393, Percent_Identity=43.765903307888, Blast_Score=324, Evalue=6e-90, Organism=Saccharomyces cerevisiae, GI6324783, Length=416, Percent_Identity=30.2884615384615, Blast_Score=200, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 46461; Mature: 46330
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIPRAGAPLPAVPMIIRSLLDTDLYKFTMMQVVLHHFPGAHVEYRFKCRNPGVDLVPY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH IEAIRAEIRHLCSLRFTEAELDYLRGLRFIKSDFVDFLDLFHLSEKYIDIRPAASNDGQI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEE DIVISGPWLHTIMFEVPVLAIVNEVYFSRTQAHPQWDEGKRRLTEKLASLTRPGLEDCRI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE ADYGTRRRFSHTWHEHVLMEARSQLGSQYAGTSNVYFAMKHNMTPLGTMAHEYLQACQSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH GPRLRDSQVFALETWAREYRGDLGIALSDTYGFDAFLRDFDMFFCKLFDGVRHDSGDPFE CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH WGERMLKHYEGMRVDPQSKALIFSDSLDMPKVVRLYERFRSRCKLAFGVGTNLTNDLGYT HHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCC PLQIVIKMVRCNGQPVAKLSDAPEKTMCDDPAYLAYLKQVFGVQ HHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TTIPRAGAPLPAVPMIIRSLLDTDLYKFTMMQVVLHHFPGAHVEYRFKCRNPGVDLVPY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH IEAIRAEIRHLCSLRFTEAELDYLRGLRFIKSDFVDFLDLFHLSEKYIDIRPAASNDGQI HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEE DIVISGPWLHTIMFEVPVLAIVNEVYFSRTQAHPQWDEGKRRLTEKLASLTRPGLEDCRI EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE ADYGTRRRFSHTWHEHVLMEARSQLGSQYAGTSNVYFAMKHNMTPLGTMAHEYLQACQSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH GPRLRDSQVFALETWAREYRGDLGIALSDTYGFDAFLRDFDMFFCKLFDGVRHDSGDPFE CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH WGERMLKHYEGMRVDPQSKALIFSDSLDMPKVVRLYERFRSRCKLAFGVGTNLTNDLGYT HHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCC PLQIVIKMVRCNGQPVAKLSDAPEKTMCDDPAYLAYLKQVFGVQ HHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA