Definition | Ralstonia solanacearum GMI1000, complete genome. |
---|---|
Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is iscX [H]
Identifier: 17545745
GI number: 17545745
Start: 1078192
End: 1078389
Strand: Direct
Name: iscX [H]
Synonym: RSc1026
Alternate gene names: 17545745
Gene position: 1078192-1078389 (Clockwise)
Preceding gene: 17545744
Following gene: 17545750
Centisome position: 29.01
GC content: 59.6
Gene sequence:
>198_bases ATGAAATGGAACGATATCCAGCAGATTGCCGAAGCGCTGTATGACCAGTATCCGGACGTCGACCCGACGCGCCTGAACTT CGTCGACCTGCACAACAAAGTGGTGAGCCTGGATGGCTTCGACGACGACCACAAGCGCGGCGGCGAGAAGTTTCTCGAGG CGATCCAGCAGGCGTGGATCGACGAGGCGGCGGACTGA
Upstream 100 bases:
>100_bases AGGACCTGACCGTCGAGATCCCCAAGTATTCGATCAACCACGCCAAGGAAACCCACTGAGCCGCGCCGCTGGCGTAGCGG ATCGTGGAGGGAGCCCCAAC
Downstream 100 bases:
>100_bases TCGTCCCTGCGGCTTGCGCCCATGAAAAAACCGGCCCGAGGGCCTAATGCCGTTCAGTTAAGGCAAAAAAGGCCGCTCCG ATTGACGTCGGAGCGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MKWNDIQQIAEALYDQYPDVDPTRLNFVDLHNKVVSLDGFDDDHKRGGEKFLEAIQQAWIDEAAD
Sequences:
>Translated_65_residues MKWNDIQQIAEALYDQYPDVDPTRLNFVDLHNKVVSLDGFDDDHKRGGEKFLEAIQQAWIDEAAD >Mature_65_residues MKWNDIQQIAEALYDQYPDVDPTRLNFVDLHNKVVSLDGFDDDHKRGGEKFLEAIQQAWIDEAAD
Specific function: May function as iron donor in the assembly of iron- sulfur clusters [H]
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iscX family [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=63, Percent_Identity=50.7936507936508, Blast_Score=72, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 7549; Mature: 7549
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWNDIQQIAEALYDQYPDVDPTRLNFVDLHNKVVSLDGFDDDHKRGGEKFLEAIQQAWI CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCCHHHCCHHHHHHHHHHHHH DEAAD HHCCC >Mature Secondary Structure MKWNDIQQIAEALYDQYPDVDPTRLNFVDLHNKVVSLDGFDDDHKRGGEKFLEAIQQAWI CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCCHHHCCHHHHHHHHHHHHH DEAAD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]