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The map label for this gene is lutC [H]

Identifier: 17545751

GI number: 17545751

Start: 1084490

End: 1085221

Strand: Direct

Name: lutC [H]

Synonym: RSc1032

Alternate gene names: 17545751

Gene position: 1084490-1085221 (Clockwise)

Preceding gene: 17545750

Following gene: 17545752

Centisome position: 29.18

GC content: 72.95

Gene sequence:

>732_bases
ATGGACCCACGCGCCGACACACCCGAGCCCATTCCCGCCGACCCGCTCGACACGCGCCACGCACGCGATGCCATCTTCGC
GCGCATCCGCAACGCGCAGCGCCGGCCCGAGCAGCCGACGCAGGGCGAGCACGACGCGGTGGCCGATTATCTGGCGCGCC
ATCCGGCGGGGCCGCGCCCGCCGGTCTCCGGCAACCTCGCCGCGCATTTCGCAGAGCAGGCGCGGAAGATGGCCTCGACG
CTCGATACCGTGGCTACCCTGGCGGAGGTGCCGGCCGCCGCGGCGCGCTATCTGTCCGGCCTGGGGCTGGGGTCGCGCGC
GGTGGCCTGGAGCGCACTGCAGGCGCTCGACTGGACGGGCGCCGGCATCGCGGTCGAATGCCGTCCGCCCGTGCGCGATC
CGCAGGCCGACCAGGACCACGGCGATCTGGTCGGCATCACCGGCTGCTTCTGCGCGATCGCGGAGACGGGTTCGCTGATG
CTGCTGTCCGGTCCGGAGCAGGTGGCCTCCACCGCGCTGTTGCCCGAGACGCACATCGCGGTGGTGCCGCAGTCGCGCAT
CGTCTCCGATCTGGAAGCGGCCTACGCGCTGGTGCGCGCGGAGCGGGGCGAGCTGCCGCGCGCCACCAACGTCATCAGCG
GGCCGTCGCGCACCGGCGATATCGAGCAGACCATCGTGCTCGGCGCGCACGGGCCATACCGCGTTCACGTGATCGTCGTG
ACGCAGGCCTGA

Upstream 100 bases:

>100_bases
TGAGGCTCATGCGGGTGTCGAATACCTTTCAGCAGCCGGGCGCGCGATACCCGCGCGGCCGGCTCGTATAATCGACCGAT
TCCACGCAAGCCGCCCGGAC

Downstream 100 bases:

>100_bases
GCGGCAAGAACCGCTGCCTGGGCGGCTACACTGGCGTCTTTGTCCATCCGGCGCGCCGGATGGCGCTGCTTTCGGAGAAC
GCTTTCGTGAAACGCCTCTG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDPRADTPEPIPADPLDTRHARDAIFARIRNAQRRPEQPTQGEHDAVADYLARHPAGPRPPVSGNLAAHFAEQARKMAST
LDTVATLAEVPAAAARYLSGLGLGSRAVAWSALQALDWTGAGIAVECRPPVRDPQADQDHGDLVGITGCFCAIAETGSLM
LLSGPEQVASTALLPETHIAVVPQSRIVSDLEAAYALVRAERGELPRATNVISGPSRTGDIEQTIVLGAHGPYRVHVIVV
TQA

Sequences:

>Translated_243_residues
MDPRADTPEPIPADPLDTRHARDAIFARIRNAQRRPEQPTQGEHDAVADYLARHPAGPRPPVSGNLAAHFAEQARKMAST
LDTVATLAEVPAAAARYLSGLGLGSRAVAWSALQALDWTGAGIAVECRPPVRDPQADQDHGDLVGITGCFCAIAETGSLM
LLSGPEQVASTALLPETHIAVVPQSRIVSDLEAAYALVRAERGELPRATNVISGPSRTGDIEQTIVLGAHGPYRVHVIVV
TQA
>Mature_243_residues
MDPRADTPEPIPADPLDTRHARDAIFARIRNAQRRPEQPTQGEHDAVADYLARHPAGPRPPVSGNLAAHFAEQARKMAST
LDTVATLAEVPAAAARYLSGLGLGSRAVAWSALQALDWTGAGIAVECRPPVRDPQADQDHGDLVGITGCFCAIAETGSLM
LLSGPEQVASTALLPETHIAVVPQSRIVSDLEAAYALVRAERGELPRATNVISGPSRTGDIEQTIVLGAHGPYRVHVIVV
TQA

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

Organism=Escherichia coli, GI87081718, Length=152, Percent_Identity=34.2105263157895, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 25669; Mature: 25669

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRADTPEPIPADPLDTRHARDAIFARIRNAQRRPEQPTQGEHDAVADYLARHPAGPRP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
PVSGNLAAHFAEQARKMASTLDTVATLAEVPAAAARYLSGLGLGSRAVAWSALQALDWTG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AGIAVECRPPVRDPQADQDHGDLVGITGCFCAIAETGSLMLLSGPEQVASTALLPETHIA
CCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCEEE
VVPQSRIVSDLEAAYALVRAERGELPRATNVISGPSRTGDIEQTIVLGAHGPYRVHVIVV
ECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE
TQA
ECC
>Mature Secondary Structure
MDPRADTPEPIPADPLDTRHARDAIFARIRNAQRRPEQPTQGEHDAVADYLARHPAGPRP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
PVSGNLAAHFAEQARKMASTLDTVATLAEVPAAAARYLSGLGLGSRAVAWSALQALDWTG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AGIAVECRPPVRDPQADQDHGDLVGITGCFCAIAETGSLMLLSGPEQVASTALLPETHIA
CCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCEEE
VVPQSRIVSDLEAAYALVRAERGELPRATNVISGPSRTGDIEQTIVLGAHGPYRVHVIVV
ECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE
TQA
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA