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The map label for this gene is 17545191

Identifier: 17545191

GI number: 17545191

Start: 504711

End: 505352

Strand: Direct

Name: 17545191

Synonym: RSc0472

Alternate gene names: NA

Gene position: 504711-505352 (Clockwise)

Preceding gene: 17545190

Following gene: 17545192

Centisome position: 13.58

GC content: 66.98

Gene sequence:

>642_bases
ATGCGTCACCCCACCGCCCGTCCTGAGTCGAGCCATGCAGCAGCCACGCCGATGCGCAAGGGCGAGCTGACGCGTGCCGC
GATTCTCGATGCCGCGCTGGAACTGGCATCACGCGACGGACTGGAAGGGCTGACGATCGGTGTGCTCGCCGAGCGCATGC
AGATGAGCAAGAGCGGCGTGTTCGCGCACTTCGGCTCGCGCGAGGATCTGCAGGTGGAGGTGGTGCGCGAGTATCACCGC
CGGTTCGAGCGGGAAGTCTTCTACCCGAGCCTGACGGAACCGCGCGGGCTGCCGCGCTTGTGGAGCCTGGTGCGCCGCTG
GATGGAGCGGCGCATCCAGGAGGTCACCACGGGCTGCATCTACATCAGCGGCGCGGTGGAGTACGACGACCGCGCCGGGA
GCCCGGTGCGCGACGAACTCGTCAAGAGCGTCACGATCTGGCGGGCGGCGCTGACCCGCGCGATCGAGCAGGCGAAGGAA
GAAGGCCATCTGCGCGCCGAGGCCGATCCGAAGCTGATGCTGTTCGAGATGTACAGCCTGGAGCTGGGCCTGCATCACGA
CGCGCGTTTCCTGCGGGTGCCCGACAGCGCCGAGCTGGCCATGGTGGCGCTCAACAAACTGATTCAGTCTTACCGAACCT
GA

Upstream 100 bases:

>100_bases
GCAGGCTGACTGACGGCCTTGCACGGCACGCGAACGGCGCCCAGCGAGAGCGCGACGTGCCAGCGTGTCATGCCCCCGAA
ATGAACGGAGAGAAATCATC

Downstream 100 bases:

>100_bases
CGTGGCATCGCACACCTAGCGGTCGTCGCGCAGCACAACCAAGGAGTCCCAGATGGGTCAATACACCGCACCGTTGCGCG
ATATGCAGTTCGTCCTTCAT

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR Family Regulatory

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRHPTARPESSHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHR
RFEREVFYPSLTEPRGLPRLWSLVRRWMERRIQEVTTGCIYISGAVEYDDRAGSPVRDELVKSVTIWRAALTRAIEQAKE
EGHLRAEADPKLMLFEMYSLELGLHHDARFLRVPDSAELAMVALNKLIQSYRT

Sequences:

>Translated_213_residues
MRHPTARPESSHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHR
RFEREVFYPSLTEPRGLPRLWSLVRRWMERRIQEVTTGCIYISGAVEYDDRAGSPVRDELVKSVTIWRAALTRAIEQAKE
EGHLRAEADPKLMLFEMYSLELGLHHDARFLRVPDSAELAMVALNKLIQSYRT
>Mature_213_residues
MRHPTARPESSHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHR
RFEREVFYPSLTEPRGLPRLWSLVRRWMERRIQEVTTGCIYISGAVEYDDRAGSPVRDELVKSVTIWRAALTRAIEQAKE
EGHLRAEADPKLMLFEMYSLELGLHHDARFLRVPDSAELAMVALNKLIQSYRT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24289; Mature: 24289

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPTARPESSHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGV
CCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FAHFGSREDLQVEVVREYHRRFEREVFYPSLTEPRGLPRLWSLVRRWMERRIQEVTTGCI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE
YISGAVEYDDRAGSPVRDELVKSVTIWRAALTRAIEQAKEEGHLRAEADPKLMLFEMYSL
EEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEHHHHHH
ELGLHHDARFLRVPDSAELAMVALNKLIQSYRT
HHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHPTARPESSHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGV
CCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FAHFGSREDLQVEVVREYHRRFEREVFYPSLTEPRGLPRLWSLVRRWMERRIQEVTTGCI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE
YISGAVEYDDRAGSPVRDELVKSVTIWRAALTRAIEQAKEEGHLRAEADPKLMLFEMYSL
EEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEHHHHHH
ELGLHHDARFLRVPDSAELAMVALNKLIQSYRT
HHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA