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The map label for this gene is mmgC [H]

Identifier: 17545192

GI number: 17545192

Start: 505405

End: 507192

Strand: Direct

Name: mmgC [H]

Synonym: RSc0473

Alternate gene names: 17545192

Gene position: 505405-507192 (Clockwise)

Preceding gene: 17545191

Following gene: 17545193

Centisome position: 13.6

GC content: 66.05

Gene sequence:

>1788_bases
ATGGGTCAATACACCGCACCGTTGCGCGATATGCAGTTCGTCCTTCATGAGCTTCTCGATGTCGAGGGGCATCTGAAGGC
GATGCCGGCGCATGCGGAGATCGACGCCGATACCATCAACCAGGTGATCGAAGAAGCCGGCAAGTTCTGCTCGGAAGTCA
TCTTCCCGCTCAACCAGTCGGGCGATCGCGAGGGCTGCACCTACCACGGCGACGGCGTCGTGACGGCCCCCAAGGGCTTC
AAGGAAGCGTACAAGCAATACGTCGAAGGCGGCTGGCCGGCGCTGGGCTGCGATCCGGAATTCGGCGGCCAGGGCCTGCC
GATCCTGGTCAACAACGCCGTCTACGAGATGCTGAACTCGGCCAACCAGGCGTGGACGATGTACCCCGGCCTGTCGCACG
GCGCCTACGAGGCCCTGCACGCGCACGGCACGGATGAACTCAAGCAGCGCTACCTGCCCAAGCTGGTGTCGGGCGAGTGG
ACCGGCACGATGTGCCTGACCGAGCCGCATTGCGGCACCGACCTCGGCATCCTGCGCACCAGGGCCGAGCCGCTGGCCGA
CGGCGCGTACGCCATCACCGGCACGAAGATCTTCATCTCGGCGGGCGAGCACGACCTGTCGGACAACATCATCCACCTGG
TGCTGGCCCGCCTGCCGGATGCGCCGGCCGGCACCAAGGGCATCTCGCTGTTCGTGGTGCCGAAGTTCATCCCCGATGCC
GCCGGCAACCCGGGCGAGCGCAACGGCGTGAAGTGCGGCTCCATCGAGCACAAGATGGGCATCCACGGCAACGCCACCTG
CGTGATCAACCTGGACGGCGCGCGCGGCTGGATGGTCGGCGAGCCGAACAAGGGCCTGAACGCCATGTTCGTGATGATGA
ACGCCGCCCGCCTGGGCGTCGGCATGCAGGGCCTGGGCCTGACGGAAGTGGCCTACCAGAACTCGGCGGCCTACGCCAAG
GAGCGCCTGCAGATGCGCAGCCTCTCCGGCCCGAAGGCGCCGGACAAGCCGGCCGACCCCATCATCGTGCACCCGGATGT
GCGCCGCATGCTGCTGACCCAGCGCGCCTACGCCGAGGGCGGCCGCGCCTTCGCCTACTGGATCGCGCTGCAGATCGACC
GCGAGCTGTCGCACCCGGACGAATCGGTGCGCAAGGAGGCCGCCGATCTCGTCGCGCTGCTCACGCCCGTCATCAAGGCC
TTCCTGACCGACAACGCCTTCACCGCCACCAACGAGGGCATGCAGGTGTTCGGCGGCCACGGCTATATTGCCGAGTGGGG
CATGGAGCAGTACGTGCGCGATGCCCGCATCAACATGATCTACGAAGGCACGAACACTGTGCAGTCGCTGGACCTGCTGG
GCCGCAAGATCCTGGGCGACATGGGCGCCAAGATGAAGAAGTTCGGCAAGATCGTGCAGGACTTCGTCGAGGCCGAAGGC
ACCAATGAGGCCATGCAGGAATTCGTCAACCCGCTGGCCGACATCGGCGACAAGGTCCAGAAGCTGACCATGGAGATCGG
CATGAAGGCGATGGCGAACCCGGATGAAGTCGGCGCCGCCGCCGTGCCGTACCTGCGCGTGGTCGGTCACCTGGTGTTCG
CCTACTTCTGGGCCCGCATGGCCAAGCTCGCGCTGGACAAGCAGGGCAACGGCGACACCTTCTACAAGGCCAAGCTGGCG
ACGGCGCGCTTCTACTTCGCCAAGCTGCTGCCCGAGACGGCGTACCAGATCCGCGCCGCGCGCACGGGCGTCAAGCCGCT
GATGGACCTCGAAGCCGAGCTGTTCTGA

Upstream 100 bases:

>100_bases
CTGGCCATGGTGGCGCTCAACAAACTGATTCAGTCTTACCGAACCTGACGTGGCATCGCACACCTAGCGGTCGTCGCGCA
GCACAACCAAGGAGTCCCAG

Downstream 100 bases:

>100_bases
CAGCCGCCCCCCAACTCGGGGCGACGTGCAGCCGCGTCGCCCCGCCCGTCTCTTCCTCTCTCCCCCGCGAGGACATAATG
ACCCGCACCGAACTCCCGAC

Product: acyl-CoA dehydrogenase oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQYTAPLRDMQFVLHELLDVEGHLKAMPAHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGF
KEAYKQYVEGGWPALGCDPEFGGQGLPILVNNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEW
TGTMCLTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDA
AGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAK
ERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKA
FLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKIVQDFVEAEG
TNEAMQEFVNPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFAYFWARMAKLALDKQGNGDTFYKAKLA
TARFYFAKLLPETAYQIRAARTGVKPLMDLEAELF

Sequences:

>Translated_595_residues
MGQYTAPLRDMQFVLHELLDVEGHLKAMPAHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGF
KEAYKQYVEGGWPALGCDPEFGGQGLPILVNNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEW
TGTMCLTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDA
AGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAK
ERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKA
FLTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKIVQDFVEAEG
TNEAMQEFVNPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFAYFWARMAKLALDKQGNGDTFYKAKLA
TARFYFAKLLPETAYQIRAARTGVKPLMDLEAELF
>Mature_594_residues
GQYTAPLRDMQFVLHELLDVEGHLKAMPAHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFK
EAYKQYVEGGWPALGCDPEFGGQGLPILVNNAVYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWT
GTMCLTEPHCGTDLGILRTRAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDAA
GNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSAAYAKE
RLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEGGRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAF
LTDNAFTATNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKIVQDFVEAEGT
NEAMQEFVNPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFAYFWARMAKLALDKQGNGDTFYKAKLAT
ARFYFAKLLPETAYQIRAARTGVKPLMDLEAELF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=416, Percent_Identity=26.6826923076923, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=29.6703296703297, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI21361497, Length=425, Percent_Identity=25.4117647058824, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI4557235, Length=420, Percent_Identity=26.4285714285714, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI76496475, Length=420, Percent_Identity=26.4285714285714, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI226958412, Length=460, Percent_Identity=25, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4557233, Length=424, Percent_Identity=25.2358490566038, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI226958414, Length=395, Percent_Identity=25.8227848101266, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=324, Percent_Identity=26.8518518518519, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI4557231, Length=315, Percent_Identity=26.031746031746, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI187960098, Length=315, Percent_Identity=26.031746031746, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4503943, Length=351, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7669494, Length=216, Percent_Identity=28.2407407407407, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082384, Length=355, Percent_Identity=26.7605633802817, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI87081958, Length=403, Percent_Identity=25.3101736972705, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=432, Percent_Identity=25.6944444444444, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=423, Percent_Identity=26.0047281323877, Blast_Score=119, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=369, Percent_Identity=28.1842818428184, Blast_Score=115, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=27.8514588859416, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=432, Percent_Identity=26.6203703703704, Blast_Score=108, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=25.7534246575342, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=382, Percent_Identity=24.3455497382199, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=24.0437158469945, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=31.7204301075269, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=30.5555555555556, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=292, Percent_Identity=24.6575342465753, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356377, Length=379, Percent_Identity=27.1767810026385, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646207, Length=385, Percent_Identity=25.4545454545455, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24666513, Length=384, Percent_Identity=27.0833333333333, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI281363737, Length=449, Percent_Identity=24.4988864142539, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355753, Length=385, Percent_Identity=25.4545454545455, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=26.3492063492064, Blast_Score=84, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=25.3263707571802, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64906; Mature: 64775

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYTAPLRDMQFVLHELLDVEGHLKAMPAHAEIDADTINQVIEEAGKFCSEVIFPLNQS
CCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDREGCTYHGDGVVTAPKGFKEAYKQYVEGGWPALGCDPEFGGQGLPILVNNAVYEMLNS
CCCCCCEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC
ANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH
RAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDA
CCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
AGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCC
GMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEG
CCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGH
CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCC
GYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKIVQDFVEAEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNEAMQEFVNPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFAYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKLALDKQGNGDTFYKAKLATARFYFAKLLPETAYQIRAARTGVKPLMDLEAELF
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
GQYTAPLRDMQFVLHELLDVEGHLKAMPAHAEIDADTINQVIEEAGKFCSEVIFPLNQS
CCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDREGCTYHGDGVVTAPKGFKEAYKQYVEGGWPALGCDPEFGGQGLPILVNNAVYEMLNS
CCCCCCEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC
ANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGEWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH
RAEPLADGAYAITGTKIFISAGEHDLSDNIIHLVLARLPDAPAGTKGISLFVVPKFIPDA
CCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
AGNPGERNGVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCC
GMQGLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAYAEG
CCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFAYWIALQIDRELSHPDESVRKEAADLVALLTPVIKAFLTDNAFTATNEGMQVFGGH
CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCC
GYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKIVQDFVEAEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNEAMQEFVNPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFAYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKLALDKQGNGDTFYKAKLATARFYFAKLLPETAYQIRAARTGVKPLMDLEAELF
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]