Click here to switch to the map view.

The map label for this gene is ydiF [H]

Identifier: 17545190

GI number: 17545190

Start: 502672

End: 504333

Strand: Direct

Name: ydiF [H]

Synonym: RSc0471

Alternate gene names: 17545190

Gene position: 502672-504333 (Clockwise)

Preceding gene: 17545189

Following gene: 17545191

Centisome position: 13.53

GC content: 71.9

Gene sequence:

>1662_bases
ATGCAGGTCATCACGGCGGAGGAAGCGGCGCGGCTGGTGCAGCCGGGCTGGACGGTGGCGTGCGCCGGCTTCGTCGGCGC
GGGCCATGCGGAGGCGGTGACGCACGCGCTGGAACGCCGTTTCCTGGCCACCGGCGAACCGCGCGACCTCACGCTGGTGT
ACTCCGCCGGCCAGGGCGACCGTGCCACGCGCGGCGTCAACCACTTCGGCAACCCCGGCATGACGCGCTGCGTGGTCGGC
GGCCATTGGCGCTCGGCGACGCGGCTGGCCGCGCTGGCGCTGGCCGAGCAGTGCGAGGCCTTCAACCTCCCGCAGGGCGT
GCTGACGCACCTGTACCGCGCCATCGCCGGCGGCAAGCCGGGCGTGCTGACCAGGATCGGCCTGCATACCTTTGTCGATC
CGCGGACCTCGCTCGATGCGCGCTACCACGGCGCGGCCATCAACGCGCGCGCCCGGGCGGCCCGCGCGGCCGGCACCGCG
TCGTGGGTCGAATACGAGCGCTTTCGCGGCGAGGACTACCTGTTCTATCCGCGCTTCCCGTTGCATTGCGTCTTCCTGCG
CGGCACCGCGGCCGACTCGCGCGGCAACATCAGCACGCACGAGGAAGCCTTCCACCACGAGCTGCTGGCGATGGCGCAGG
CCGCGCGCAATGCGGGCGGCATCGTCGTCGCGCAGGTGCGGCGGCTGGTGGACCGGCACGACAATCTGCAGGCGGTCCAC
GTGCCGGGCATCCTGGTCGACTACGTCGTCGTGGCCGAGGATTCGGCCGAACACCAGATGACGTTCGGCGAGGCGTTCAA
CCCGGCCTACCTCCGGCCCTGGCAGGGCGAAGCGATTCAGCTGCGCGAGGACGCGCTGGAAGCCGGCGCGGCGCTGCAGG
CCAGCCTGCACGGCGTGCTCGATGCCCGCACGCTGGTGCAGCGGCGCGCGGTGCTGGAGCTGATGGCGCGGCGGCCGCGC
GTGGTGAACCTGGGCGTGGGCATGCCCGCCGCCGTCGGCGCGCTGGCCGAGCAGGAGGGCGCGCGCGGCTTCACGCTGAC
CGTCGAGGCCGGGCCGATCGGCGGCACGCCGGCCGATGGGCTGAGCTTCGGCGCATCGGCTTATCCGGAGGCGGTGGTCG
ACCAGCCGGCGCAGTTCGATTTCTACGAGGGCGGTGGCATTGACCTCGCCATTCTCGGCCTGGCCGAACTGGATGGGCAG
GGCAACGTCAACGTCAGCCTGTTCGGTGAAGGCGACGACACGATCGTCGCGGGTGTCGGCGGCTTCATCAACATCACGCA
GAGCGCGCGGGCCCTGGTGTTCATGGGCACGCTCACGGCCGGCGGCCTGCAGGTGGAGGCTGAAGACGGCCGCCTGCGCA
TCGTGCGCGAAGGGCGCCTGAAGAAGATCGTGCCGGCCGTGTCGCACTTGACCTTCAACGGGGCGTACGCGGCGCGGTCC
GGCATTCCGGTGCGCTATGTGACCGAGCGCGCGGTCTTCGAGATGCGCGACGACGGCCACGGCGGGCGCCGGCTGACGCT
GACGGAAATCGCTCCCGGCATCGATCTGCGGCGCGACGTGCTCGACCAGTGCGCCGCCGAGGTTGCCGTGGCAGCCGATC
TGCGCGAGATGGACCACCGCATCTTCCGCCGCGGTCCGATGTGCGGCGGGGCGGCGGCATGA

Upstream 100 bases:

>100_bases
ACTGGTGCGCGTATCGGCTGGTGCGGCTGGGCGTCGTCATCAGCGGCCGCGCGGCGCACTACTGACGCAAGGCGGGCGCC
TGCAATCACACGGAGGGGAC

Downstream 100 bases:

>100_bases
TTGGGGCGGGTGTTTTCCGTGTCTTGCGGCCGCGTTCTATTTACTGATCGGTAGTACTAGATCGGGGCCGTTGATGTTGC
GCCGCGCGTGTTTTCATGAT

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MQVITAEEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLATGEPRDLTLVYSAGQGDRATRGVNHFGNPGMTRCVVG
GHWRSATRLAALALAEQCEAFNLPQGVLTHLYRAIAGGKPGVLTRIGLHTFVDPRTSLDARYHGAAINARARAARAAGTA
SWVEYERFRGEDYLFYPRFPLHCVFLRGTAADSRGNISTHEEAFHHELLAMAQAARNAGGIVVAQVRRLVDRHDNLQAVH
VPGILVDYVVVAEDSAEHQMTFGEAFNPAYLRPWQGEAIQLREDALEAGAALQASLHGVLDARTLVQRRAVLELMARRPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGQ
GNVNVSLFGEGDDTIVAGVGGFINITQSARALVFMGTLTAGGLQVEAEDGRLRIVREGRLKKIVPAVSHLTFNGAYAARS
GIPVRYVTERAVFEMRDDGHGGRRLTLTEIAPGIDLRRDVLDQCAAEVAVAADLREMDHRIFRRGPMCGGAAA

Sequences:

>Translated_553_residues
MQVITAEEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLATGEPRDLTLVYSAGQGDRATRGVNHFGNPGMTRCVVG
GHWRSATRLAALALAEQCEAFNLPQGVLTHLYRAIAGGKPGVLTRIGLHTFVDPRTSLDARYHGAAINARARAARAAGTA
SWVEYERFRGEDYLFYPRFPLHCVFLRGTAADSRGNISTHEEAFHHELLAMAQAARNAGGIVVAQVRRLVDRHDNLQAVH
VPGILVDYVVVAEDSAEHQMTFGEAFNPAYLRPWQGEAIQLREDALEAGAALQASLHGVLDARTLVQRRAVLELMARRPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGQ
GNVNVSLFGEGDDTIVAGVGGFINITQSARALVFMGTLTAGGLQVEAEDGRLRIVREGRLKKIVPAVSHLTFNGAYAARS
GIPVRYVTERAVFEMRDDGHGGRRLTLTEIAPGIDLRRDVLDQCAAEVAVAADLREMDHRIFRRGPMCGGAAA
>Mature_553_residues
MQVITAEEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLATGEPRDLTLVYSAGQGDRATRGVNHFGNPGMTRCVVG
GHWRSATRLAALALAEQCEAFNLPQGVLTHLYRAIAGGKPGVLTRIGLHTFVDPRTSLDARYHGAAINARARAARAAGTA
SWVEYERFRGEDYLFYPRFPLHCVFLRGTAADSRGNISTHEEAFHHELLAMAQAARNAGGIVVAQVRRLVDRHDNLQAVH
VPGILVDYVVVAEDSAEHQMTFGEAFNPAYLRPWQGEAIQLREDALEAGAALQASLHGVLDARTLVQRRAVLELMARRPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGQ
GNVNVSLFGEGDDTIVAGVGGFINITQSARALVFMGTLTAGGLQVEAEDGRLRIVREGRLKKIVPAVSHLTFNGAYAARS
GIPVRYVTERAVFEMRDDGHGGRRLTLTEIAPGIDLRRDVLDQCAAEVAVAADLREMDHRIFRRGPMCGGAAA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=544, Percent_Identity=37.6838235294118, Blast_Score=347, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 59056; Mature: 59056

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVITAEEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLATGEPRDLTLVYSAGQGD
CCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
RATRGVNHFGNPGMTRCVVGGHWRSATRLAALALAEQCEAFNLPQGVLTHLYRAIAGGKP
CHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GVLTRIGLHTFVDPRTSLDARYHGAAINARARAARAAGTASWVEYERFRGEDYLFYPRFP
CEEEEECHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCC
LHCVFLRGTAADSRGNISTHEEAFHHELLAMAQAARNAGGIVVAQVRRLVDRHDNLQAVH
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE
VPGILVDYVVVAEDSAEHQMTFGEAFNPAYLRPWQGEAIQLREDALEAGAALQASLHGVL
CCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEEHHHHHHHCHHHHHHHHHHH
DARTLVQRRAVLELMARRPRVVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADG
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
LSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGQGNVNVSLFGEGDDTIVAGVG
CCCCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEECC
GFINITQSARALVFMGTLTAGGLQVEAEDGRLRIVREGRLKKIVPAVSHLTFNGAYAARS
CEEEECCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHEEECCCHHHCC
GIPVRYVTERAVFEMRDDGHGGRRLTLTEIAPGIDLRRDVLDQCAAEVAVAADLREMDHR
CCCEEEEHHHHHEEECCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFRRGPMCGGAAA
HHHCCCCCCCCCC
>Mature Secondary Structure
MQVITAEEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLATGEPRDLTLVYSAGQGD
CCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
RATRGVNHFGNPGMTRCVVGGHWRSATRLAALALAEQCEAFNLPQGVLTHLYRAIAGGKP
CHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GVLTRIGLHTFVDPRTSLDARYHGAAINARARAARAAGTASWVEYERFRGEDYLFYPRFP
CEEEEECHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCC
LHCVFLRGTAADSRGNISTHEEAFHHELLAMAQAARNAGGIVVAQVRRLVDRHDNLQAVH
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE
VPGILVDYVVVAEDSAEHQMTFGEAFNPAYLRPWQGEAIQLREDALEAGAALQASLHGVL
CCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEEHHHHHHHCHHHHHHHHHHH
DARTLVQRRAVLELMARRPRVVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADG
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
LSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGQGNVNVSLFGEGDDTIVAGVG
CCCCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEECC
GFINITQSARALVFMGTLTAGGLQVEAEDGRLRIVREGRLKKIVPAVSHLTFNGAYAARS
CEEEECCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHEEECCCHHHCC
GIPVRYVTERAVFEMRDDGHGGRRLTLTEIAPGIDLRRDVLDQCAAEVAVAADLREMDHR
CCCEEEEHHHHHEEECCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFRRGPMCGGAAA
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]