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The map label for this gene is 17230027

Identifier: 17230027

GI number: 17230027

Start: 3040869

End: 3041675

Strand: Direct

Name: 17230027

Synonym: alr2535

Alternate gene names: NA

Gene position: 3040869-3041675 (Clockwise)

Preceding gene: 17230024

Following gene: 17230028

Centisome position: 47.41

GC content: 37.05

Gene sequence:

>807_bases
GTGATTGGGCCATCAAATACAGCAAAAGGCATACCAGAAATTGGTGATTATGTGGCGCGCGTTTCTGCACCTGTGTCTGT
AGTTGCACCCAATTCAGTCAAAGCTGCACTTAAGCAAAATCCCAACATTAAAAAAGTCGCGGTTTTCTTCGCTCAAAATG
ATGCCTTTAGTAAATCAGAAACAGAGATTTTTCAACAAACTATTAAGGAACAAGGGCTGGAATTAGTAACAGTACAAAAG
TTCCAAACTACTGATACTGACTTTCAATCTCAGGCGACTAATGCGATTAATTTAAAACCTGATTTGGTGATTATTTCTGG
ACTAGCTGCCGATGGTGGCAACTTAGTTAGACAGTTGCGTGAATTGGGTTATCAAGGTGCAATTATTGGTGGTAATGGTT
TAAATACCTCAAATGTTTTCGCAGTTTGTAAAGCACTGTGTGATGGCGTGTTAATAGCTCAAGCTTACAGTCCAGAATAT
ACTGGTGAAATTAATAAAGCATTTCGCCAAGCCTATGTTGATCAATATAAGAAAGAACCGCCTCAATTTAGCGCTCAAGC
TTTTGCCGCAGTACAAGTATATGTAGAATCTCTCAAAGCATTAGACAGCATGAACAAAGTTAGTAAAATACAGTTACCGG
AATTACGTACAGAATTGAACAAACAGCTACTAACAGGTAAATACAATACACCATTAGGAGAAATTAGTTTTACACCAATT
GGTGAAGTTGTACAACAAGATTTTTATGTAGCTCAAATTAAAATGGAAAAGGATGGTAGTCAAGGTAAGTTTACATTTTT
GAAATAG

Upstream 100 bases:

>100_bases
AACTCTTATCAATAAAGATAAAGTCGTAGGTATTGTAGGGCCTACATTATCCCAACAAGCCTTTAGTGCTAATCCTATTG
CTGAAAGAGCAAAAGTCCCA

Downstream 100 bases:

>100_bases
GAAATTTAGGGTGGATAGTGGGAGGGTGAAGAAAACTATTGACTAATGACAACTGACAACTGACAACTGACTAAATTAAA
TGGATATTAGTGTATTTTTA

Product: branched-chain amino-acid ABC transport system periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MIGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSETEIFQQTIKEQGLELVTVQK
FQTTDTDFQSQATNAINLKPDLVIISGLAADGGNLVRQLRELGYQGAIIGGNGLNTSNVFAVCKALCDGVLIAQAYSPEY
TGEINKAFRQAYVDQYKKEPPQFSAQAFAAVQVYVESLKALDSMNKVSKIQLPELRTELNKQLLTGKYNTPLGEISFTPI
GEVVQQDFYVAQIKMEKDGSQGKFTFLK

Sequences:

>Translated_268_residues
MIGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSETEIFQQTIKEQGLELVTVQK
FQTTDTDFQSQATNAINLKPDLVIISGLAADGGNLVRQLRELGYQGAIIGGNGLNTSNVFAVCKALCDGVLIAQAYSPEY
TGEINKAFRQAYVDQYKKEPPQFSAQAFAAVQVYVESLKALDSMNKVSKIQLPELRTELNKQLLTGKYNTPLGEISFTPI
GEVVQQDFYVAQIKMEKDGSQGKFTFLK
>Mature_268_residues
MIGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSETEIFQQTIKEQGLELVTVQK
FQTTDTDFQSQATNAINLKPDLVIISGLAADGGNLVRQLRELGYQGAIIGGNGLNTSNVFAVCKALCDGVLIAQAYSPEY
TGEINKAFRQAYVDQYKKEPPQFSAQAFAAVQVYVESLKALDSMNKVSKIQLPELRTELNKQLLTGKYNTPLGEISFTPI
GEVVQQDFYVAQIKMEKDGSQGKFTFLK

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29197; Mature: 29197

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSE
CCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCHHH
TEIFQQTIKEQGLELVTVQKFQTTDTDFQSQATNAINLKPDLVIISGLAADGGNLVRQLR
HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHH
ELGYQGAIIGGNGLNTSNVFAVCKALCDGVLIAQAYSPEYTGEINKAFRQAYVDQYKKEP
HCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
PQFSAQAFAAVQVYVESLKALDSMNKVSKIQLPELRTELNKQLLTGKYNTPLGEISFTPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCH
GEVVQQDFYVAQIKMEKDGSQGKFTFLK
HHHHHCCEEEEEEEEECCCCCCCEEECC
>Mature Secondary Structure
MIGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQNPNIKKVAVFFAQNDAFSKSE
CCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEEEEECCCCCCHHH
TEIFQQTIKEQGLELVTVQKFQTTDTDFQSQATNAINLKPDLVIISGLAADGGNLVRQLR
HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHH
ELGYQGAIIGGNGLNTSNVFAVCKALCDGVLIAQAYSPEYTGEINKAFRQAYVDQYKKEP
HCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
PQFSAQAFAAVQVYVESLKALDSMNKVSKIQLPELRTELNKQLLTGKYNTPLGEISFTPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCH
GEVVQQDFYVAQIKMEKDGSQGKFTFLK
HHHHHCCEEEEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA