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The map label for this gene is 17228525

Identifier: 17228525

GI number: 17228525

Start: 1200905

End: 1201666

Strand: Direct

Name: 17228525

Synonym: alr1030

Alternate gene names: NA

Gene position: 1200905-1201666 (Clockwise)

Preceding gene: 17228524

Following gene: 17228526

Centisome position: 18.72

GC content: 42.91

Gene sequence:

>762_bases
ATGACGCTGAGTGAAGATTTAAATTTTGCCGAACAGGCTGCTGATGTAGATGCAGCCGCATCAAATTATCCCGTTGTCTT
TGGTATTAGTTTCACACCTAAAATCATTGGCATTCTCGTAGGTGTACTGGGTCTAGCAGGCGCTTTGTATATGCTCCTCA
ATATGGTTATGCCAGCTTGGGATATCTATCAGCAGAAGCAAGCTCAAAGTGCCGAATTAGAAGGTCAAGTATTGCAAAAA
AAAGCCACTGTTAAACAAAAGGGCCAAGTTATGGAAGAACTAGCCCAAGCCAAACAGCAAAGACAACAGGTTTTAGCTTT
ATTTGCTGATGAAAAAACCTTAGATACCATGTTGTTGGATCTGAATCGTTTAGTAGAAGGCGGGAATGCTAAAACTCCTC
TCAATGCGGTGAGAGCTAAACTACAAAAATTTGTGCCAGCTATCCAAAAACCAGAGCCTGTTACTGATGGGTCGCTAGGA
CCAGCAGTTGACGGCAAGCTGAAACGCTCTAGCGTTAATATCGAAATTATCGGCACTTATGAACAAACACAATCGATTAT
TCGTAATATAGAACGTTTACAGCCTTTATTAATAGTTAAAGACTATCAATCAACATTAGCTAACGTACAGGCTACTGATA
GGTCAGGCAAACCCATACGCAGGTTAGGCCCAGCACCAATCACCACATCTTTTCAACTGCAAGCATTAATGCCCTTAAGT
CCTGAGGACGCGGCGGCTGCTCAGGCTGCGCCTAAGAAGTAG

Upstream 100 bases:

>100_bases
ATGTTCCAGCTTCTGAATTAATTCGGGAGTTAGAACAAAAAGGCACTGTCGGACTGGTGACTCGGATTCGAGCTATGCAA
CAAACAGGAGTCATTACGAG

Downstream 100 bases:

>100_bases
GGAGCAGGGGGCAGGGAGCAGGGGGAGAAATCTTATTCAATACTCTCTACTCAGCAGTTTTTACTTCGATATTTTTAGTT
ACAAGACTTTATTAGGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTLSEDLNFAEQAADVDAAASNYPVVFGISFTPKIIGILVGVLGLAGALYMLLNMVMPAWDIYQQKQAQSAELEGQVLQK
KATVKQKGQVMEELAQAKQQRQQVLALFADEKTLDTMLLDLNRLVEGGNAKTPLNAVRAKLQKFVPAIQKPEPVTDGSLG
PAVDGKLKRSSVNIEIIGTYEQTQSIIRNIERLQPLLIVKDYQSTLANVQATDRSGKPIRRLGPAPITTSFQLQALMPLS
PEDAAAAQAAPKK

Sequences:

>Translated_253_residues
MTLSEDLNFAEQAADVDAAASNYPVVFGISFTPKIIGILVGVLGLAGALYMLLNMVMPAWDIYQQKQAQSAELEGQVLQK
KATVKQKGQVMEELAQAKQQRQQVLALFADEKTLDTMLLDLNRLVEGGNAKTPLNAVRAKLQKFVPAIQKPEPVTDGSLG
PAVDGKLKRSSVNIEIIGTYEQTQSIIRNIERLQPLLIVKDYQSTLANVQATDRSGKPIRRLGPAPITTSFQLQALMPLS
PEDAAAAQAAPKK
>Mature_252_residues
TLSEDLNFAEQAADVDAAASNYPVVFGISFTPKIIGILVGVLGLAGALYMLLNMVMPAWDIYQQKQAQSAELEGQVLQKK
ATVKQKGQVMEELAQAKQQRQQVLALFADEKTLDTMLLDLNRLVEGGNAKTPLNAVRAKLQKFVPAIQKPEPVTDGSLGP
AVDGKLKRSSVNIEIIGTYEQTQSIIRNIERLQPLLIVKDYQSTLANVQATDRSGKPIRRLGPAPITTSFQLQALMPLSP
EDAAAAQAAPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27448; Mature: 27317

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSEDLNFAEQAADVDAAASNYPVVFGISFTPKIIGILVGVLGLAGALYMLLNMVMPAW
CCCCHHCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIYQQKQAQSAELEGQVLQKKATVKQKGQVMEELAQAKQQRQQVLALFADEKTLDTMLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LNRLVEGGNAKTPLNAVRAKLQKFVPAIQKPEPVTDGSLGPAVDGKLKRSSVNIEIIGTY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECH
EQTQSIIRNIERLQPLLIVKDYQSTLANVQATDRSGKPIRRLGPAPITTSFQLQALMPLS
HHHHHHHHHHHHHCHHEEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCC
PEDAAAAQAAPKK
CCHHHHHCCCCCC
>Mature Secondary Structure 
TLSEDLNFAEQAADVDAAASNYPVVFGISFTPKIIGILVGVLGLAGALYMLLNMVMPAW
CCCHHCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIYQQKQAQSAELEGQVLQKKATVKQKGQVMEELAQAKQQRQQVLALFADEKTLDTMLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LNRLVEGGNAKTPLNAVRAKLQKFVPAIQKPEPVTDGSLGPAVDGKLKRSSVNIEIIGTY
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECH
EQTQSIIRNIERLQPLLIVKDYQSTLANVQATDRSGKPIRRLGPAPITTSFQLQALMPLS
HHHHHHHHHHHHHCHHEEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCC
PEDAAAAQAAPKK
CCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA