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The map label for this gene is 17228524

Identifier: 17228524

GI number: 17228524

Start: 1200141

End: 1200908

Strand: Direct

Name: 17228524

Synonym: alr1029

Alternate gene names: NA

Gene position: 1200141-1200908 (Clockwise)

Preceding gene: 17228523

Following gene: 17228525

Centisome position: 18.71

GC content: 44.79

Gene sequence:

>768_bases
ATGTATGGATTAGATATTAACTTTCTCAAAGACCGCCCAGCTTACCAGTCTAATAACAAGTCCGAGAAAAAACAGGGTAT
TAAATTGCCATCTGGGAGCTTAATACCAATGTATTTGGGAGTTGGCGTAGGTCTTTGTTTCCCCATATTTGTCGGTGGTG
GGTTGTTATTTTTACAGGCGAAAACTGCGGAATTAGAGCAGGCGATCGCCTTACTAGATGAAGAGAGTAAGAAGCTGGAT
GCAGAAATCGCCAGCATTACCAAAATCAAGGAACAGACTAGTGCTGTCAAAGCCGACACCCAGAGTTTGGTGATGGTGTT
TGACCAGATTCGTCCTTGGTCAGCAATGTTAGAAGATTTGCGCGATCGCATTCCCGCAAGTGTGCAGATTGAAATTGTTA
GACAAACGCCACCTACACCCCCAGCCGCAGGACAGCCCCCTGGTAATCCAGCTGGTGGGATAGAAATTACTGGCTTGGCT
CGTTCCTTTAATGATGTCAATGACTTCTTATTACTCTTACAACAATCCCGTTTTTTGAAGTCTGCTGACACCAAAATTAT
TACAGCCAGCCTAGCAGATGCGCCAGTACAAGCTGGTAGTGGTAACAGTGCGGGAATTAAACCACCCCAAGTAGTTAAAT
ACACTATTCAATCCAGCCTCAGTGATGTTCCAGCTTCTGAATTAATTCGGGAGTTAGAACAAAAAGGCACTGTCGGACTG
GTGACTCGGATTCGAGCTATGCAACAAACAGGAGTCATTACGAGATGA

Upstream 100 bases:

>100_bases
CCAATTCAAAATTATATCGGATTCCTATAGAAAAGTCAGTTTTTATCGGGATTTCCGGTTTTAAGTCTGTTTCCCTATTT
TGGAGAATTGGTATAAGAGA

Downstream 100 bases:

>100_bases
CGCTGAGTGAAGATTTAAATTTTGCCGAACAGGCTGCTGATGTAGATGCAGCCGCATCAAATTATCCCGTTGTCTTTGGT
ATTAGTTTCACACCTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilN-Like; Fimbrial Assembly Protein PilN; Fimbrial Assembly Protein; Fimbrial Assembly Protein Family Protein; Fimbrial Assembly; Type 4 Fimbrial Biogenesis Protein PilN; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MYGLDINFLKDRPAYQSNNKSEKKQGIKLPSGSLIPMYLGVGVGLCFPIFVGGGLLFLQAKTAELEQAIALLDEESKKLD
AEIASITKIKEQTSAVKADTQSLVMVFDQIRPWSAMLEDLRDRIPASVQIEIVRQTPPTPPAAGQPPGNPAGGIEITGLA
RSFNDVNDFLLLLQQSRFLKSADTKIITASLADAPVQAGSGNSAGIKPPQVVKYTIQSSLSDVPASELIRELEQKGTVGL
VTRIRAMQQTGVITR

Sequences:

>Translated_255_residues
MYGLDINFLKDRPAYQSNNKSEKKQGIKLPSGSLIPMYLGVGVGLCFPIFVGGGLLFLQAKTAELEQAIALLDEESKKLD
AEIASITKIKEQTSAVKADTQSLVMVFDQIRPWSAMLEDLRDRIPASVQIEIVRQTPPTPPAAGQPPGNPAGGIEITGLA
RSFNDVNDFLLLLQQSRFLKSADTKIITASLADAPVQAGSGNSAGIKPPQVVKYTIQSSLSDVPASELIRELEQKGTVGL
VTRIRAMQQTGVITR
>Mature_255_residues
MYGLDINFLKDRPAYQSNNKSEKKQGIKLPSGSLIPMYLGVGVGLCFPIFVGGGLLFLQAKTAELEQAIALLDEESKKLD
AEIASITKIKEQTSAVKADTQSLVMVFDQIRPWSAMLEDLRDRIPASVQIEIVRQTPPTPPAAGQPPGNPAGGIEITGLA
RSFNDVNDFLLLLQQSRFLKSADTKIITASLADAPVQAGSGNSAGIKPPQVVKYTIQSSLSDVPASELIRELEQKGTVGL
VTRIRAMQQTGVITR

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27444; Mature: 27444

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGLDINFLKDRPAYQSNNKSEKKQGIKLPSGSLIPMYLGVGVGLCFPIFVGGGLLFLQA
CCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
KTAELEQAIALLDEESKKLDAEIASITKIKEQTSAVKADTQSLVMVFDQIRPWSAMLEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RDRIPASVQIEIVRQTPPTPPAAGQPPGNPAGGIEITGLARSFNDVNDFLLLLQQSRFLK
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
SADTKIITASLADAPVQAGSGNSAGIKPPQVVKYTIQSSLSDVPASELIRELEQKGTVGL
HCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
VTRIRAMQQTGVITR
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MYGLDINFLKDRPAYQSNNKSEKKQGIKLPSGSLIPMYLGVGVGLCFPIFVGGGLLFLQA
CCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
KTAELEQAIALLDEESKKLDAEIASITKIKEQTSAVKADTQSLVMVFDQIRPWSAMLEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RDRIPASVQIEIVRQTPPTPPAAGQPPGNPAGGIEITGLARSFNDVNDFLLLLQQSRFLK
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
SADTKIITASLADAPVQAGSGNSAGIKPPQVVKYTIQSSLSDVPASELIRELEQKGTVGL
HCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
VTRIRAMQQTGVITR
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA