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The map label for this gene is xcpQ [H]

Identifier: 17228526

GI number: 17228526

Start: 1201776

End: 1204247

Strand: Direct

Name: xcpQ [H]

Synonym: alr1031

Alternate gene names: 17228526

Gene position: 1201776-1204247 (Clockwise)

Preceding gene: 17228525

Following gene: 17228531

Centisome position: 18.74

GC content: 44.86

Gene sequence:

>2472_bases
GTGAAACACGTTCATGGTAATGGTTTAGTTTTAGGTGCTGCTGCTTTCGTATTTTTGGCAGCACAGCCCGTGTCGGCGCA
AACCACACAAATTACAGAAGTCAAGCTAAATCCAGGCAATGGTGGACTTAGCGTTGTTTTAAAAACTTCTGCCGGTTCTC
GTCCACAAGTTTTTACAACAAAAAGAGGCAAGGCTTTAGTTGCAGATATTATTAATACGCAACTAAGACTTCCACAAGGT
AATAACTTTCGGCAAGATAAGCCTGCTGCGGGAATTGCTTCCGTTGAGGTTGTGCAACTAGATGCTAATAGCATCCGCGT
CATCGTCACTGGTGATAGCGACGCACCGACTAGCCAACCTGTCATCCGTCAACAAGATGGCATCACCCTCAGCTTAACGC
CATCAACAGGCACTACAGCATCAGCACCAGTCACCCCCAGACCACCAGTTTCTACAACACCACCAGCTTCTACCCCAGCA
CAAACAGGTGTAGTCCCCAATGTGCTTGTACCTAATCCACAAGTGACAATTGATGGCAAACCAGCCCAGCCTGCTGGCCC
CGGACAGCCATTAAGTCAAGCGCCGCCGTTCTTACCTAGAGCCGTTGCACCTCCTGTTGGGGATATTGCTATTTCTGCGA
CTGATGCTTCTCCCAGTACTATAGATTTAGGTACTCAGGAACGTGTACCTCGTCTGGTGTTGCGCGATGCACCGGTTAGA
GAAGTTTTATCATTGCTGGCTCGTGCTGCTAACTTAAACTTGGCTTATATAAGTGATGGAGTTGGTGGGACACCTGCGGC
TGGAGGTCAAGGTATCTCGCAAACAATCTCGCTAGATATAGAAAATGAGCCAGTGCAAGATGTGTTTAACTATGTCTTGC
GTCTGAGTGGTTTAGAGGCTAACCGCAGTAATAGGACAATTTTTGTCGGGCCGAAATTACCTAACTCCACCCGTGATGTG
GTGATGCGTAACCTGCGACTCAATCAGGTAAATGTAGGAGTTGCTTTAAATTTCTTGGTTGGCTTAGGGGCTGAAACTGC
CGTTAGCCGTGAACGTCAAGTTACCAATGTCAATGCTGTACCGGTAGGGACTGGAGTTGCCCCTATCACCCAAACCCAAA
CAACCACAGAAACTAGAGTCGAAACACAAAGAATTAATTTTCAAGACTCTAATCCATTACTGAGAGGTTTACAAGCATTG
GGAGACGAGCGGACAAATTCTCTCACCTTAATTGGCCCTCCCAAGCTAGTTGAAATGGCAATGAATCAACTCACTCAGCT
TGATATTCGCCGTCGTCAAGTGGTAGTTAACGTCAAAATTATTGATGTTAATCTGAGTAACACCCAAGACAATAATGCCA
GCCTTTCTTTTGGCATTGGGAATAATTACTTCAGTAGCGATGGAGGTGCGGCATCACTAAATATTGGTGGTCTTAATCCA
CCTAGTGCTGGGAATGTGCGTAATAGTCTCAACCCAACCGTGACGACTAATCCTTATAGTAGTGGTAATACTTTCCTCGA
TTTGACTCAATCTGTTGGACCGGTTCCAGATACGGGAGTAGACACTAGAAATATCACTATCAACAATCCAGGTGGAGGCT
CTATTACTGAGACACAGGGTCAGGATCTAAACTTTGTACAGAGAAGAGCAGGGATTTCAGGAGATCCATTTGAAACTGGA
ATTACCGCCGTTACTCAAGGAACACCAAACATTATCAGAAGAACTACTACTACTGATCCAACAACAGGAGCAGTAACCGA
AACAACAACAGTTACCGAAGGAACTCGTGGATCTATAACTGCTGCGCTACCTAGCCTATTCCAGTACCCAAAACGTCTTC
TCGCTAACTTGCAAGCGCAAGTTACAAATGGTAATGCGAAGATATTGACTGACCCAACCTTAATTGTGCAAGAAGGTCAA
ACAGCTAATGTTAAACTGACGCAGGAAGTGGTGGGAAACATAACGAGCGAAACAACTCGTGGTGATGGTGCTTCTACACA
AACTGTGACAGCAGAGAAAACAGATGTAGGTTTAACCTTAGCAGTCAAAATTGATCGGATTGATGACAATGGTTTTGTTT
CCTTGTCAGTTGCTCCTGTTGTCAAAGCTCCCCAATCTTCAGCTGTAATTAATGTTTCAGGTAATAGCCAAACCATATTT
TTGGTGTCTGAGCGCTCCCTTAATTCAGGTATGATTCGTCTCAGAGATGGCCAAACGCTAATTCTTTCAGGCATCATTCA
AGACCAAGACAGAACAAGTGTATCTAAGATTCCTATCTTGGGTGATATTCCGCTTATTGGTTCTTTGTTTAGAAAGACAA
ACAGAACCAATGAGCGTAGAGAGGTAATTGTACTTCTGACACCTCAAGTTATGGATGACTCTCAAAACTCTTCTTACGGT
TATAACTATTCCCCCAGTCCAGAGGTGCGGCAAATGCTTGAGCGCCGTGGTTTAAATACTCCCAGGAGGTAA

Upstream 100 bases:

>100_bases
GGCAGGGAGCAGGGGGAGAAATCTTATTCAATACTCTCTACTCAGCAGTTTTTACTTCGATATTTTTAGTTACAAGACTT
TATTAGGTGAGGAATGAACT

Downstream 100 bases:

>100_bases
GATAGTGTACCAATTCGTAACTTCCAATGCTACCTGGGGCGTTGGCGAATTGGTATTGGTAATATAATTTGAATTTCTAG
ACTAGCCACAAGCCTTTGAG

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 823; Mature: 823

Protein sequence:

>823_residues
MKHVHGNGLVLGAAAFVFLAAQPVSAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTTKRGKALVADIINTQLRLPQG
NNFRQDKPAAGIASVEVVQLDANSIRVIVTGDSDAPTSQPVIRQQDGITLSLTPSTGTTASAPVTPRPPVSTTPPASTPA
QTGVVPNVLVPNPQVTIDGKPAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
EVLSLLARAANLNLAYISDGVGGTPAAGGQGISQTISLDIENEPVQDVFNYVLRLSGLEANRSNRTIFVGPKLPNSTRDV
VMRNLRLNQVNVGVALNFLVGLGAETAVSRERQVTNVNAVPVGTGVAPITQTQTTTETRVETQRINFQDSNPLLRGLQAL
GDERTNSLTLIGPPKLVEMAMNQLTQLDIRRRQVVVNVKIIDVNLSNTQDNNASLSFGIGNNYFSSDGGAASLNIGGLNP
PSAGNVRNSLNPTVTTNPYSSGNTFLDLTQSVGPVPDTGVDTRNITINNPGGGSITETQGQDLNFVQRRAGISGDPFETG
ITAVTQGTPNIIRRTTTTDPTTGAVTETTTVTEGTRGSITAALPSLFQYPKRLLANLQAQVTNGNAKILTDPTLIVQEGQ
TANVKLTQEVVGNITSETTRGDGASTQTVTAEKTDVGLTLAVKIDRIDDNGFVSLSVAPVVKAPQSSAVINVSGNSQTIF
LVSERSLNSGMIRLRDGQTLILSGIIQDQDRTSVSKIPILGDIPLIGSLFRKTNRTNERREVIVLLTPQVMDDSQNSSYG
YNYSPSPEVRQMLERRGLNTPRR

Sequences:

>Translated_823_residues
MKHVHGNGLVLGAAAFVFLAAQPVSAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTTKRGKALVADIINTQLRLPQG
NNFRQDKPAAGIASVEVVQLDANSIRVIVTGDSDAPTSQPVIRQQDGITLSLTPSTGTTASAPVTPRPPVSTTPPASTPA
QTGVVPNVLVPNPQVTIDGKPAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
EVLSLLARAANLNLAYISDGVGGTPAAGGQGISQTISLDIENEPVQDVFNYVLRLSGLEANRSNRTIFVGPKLPNSTRDV
VMRNLRLNQVNVGVALNFLVGLGAETAVSRERQVTNVNAVPVGTGVAPITQTQTTTETRVETQRINFQDSNPLLRGLQAL
GDERTNSLTLIGPPKLVEMAMNQLTQLDIRRRQVVVNVKIIDVNLSNTQDNNASLSFGIGNNYFSSDGGAASLNIGGLNP
PSAGNVRNSLNPTVTTNPYSSGNTFLDLTQSVGPVPDTGVDTRNITINNPGGGSITETQGQDLNFVQRRAGISGDPFETG
ITAVTQGTPNIIRRTTTTDPTTGAVTETTTVTEGTRGSITAALPSLFQYPKRLLANLQAQVTNGNAKILTDPTLIVQEGQ
TANVKLTQEVVGNITSETTRGDGASTQTVTAEKTDVGLTLAVKIDRIDDNGFVSLSVAPVVKAPQSSAVINVSGNSQTIF
LVSERSLNSGMIRLRDGQTLILSGIIQDQDRTSVSKIPILGDIPLIGSLFRKTNRTNERREVIVLLTPQVMDDSQNSSYG
YNYSPSPEVRQMLERRGLNTPRR
>Mature_823_residues
MKHVHGNGLVLGAAAFVFLAAQPVSAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTTKRGKALVADIINTQLRLPQG
NNFRQDKPAAGIASVEVVQLDANSIRVIVTGDSDAPTSQPVIRQQDGITLSLTPSTGTTASAPVTPRPPVSTTPPASTPA
QTGVVPNVLVPNPQVTIDGKPAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
EVLSLLARAANLNLAYISDGVGGTPAAGGQGISQTISLDIENEPVQDVFNYVLRLSGLEANRSNRTIFVGPKLPNSTRDV
VMRNLRLNQVNVGVALNFLVGLGAETAVSRERQVTNVNAVPVGTGVAPITQTQTTTETRVETQRINFQDSNPLLRGLQAL
GDERTNSLTLIGPPKLVEMAMNQLTQLDIRRRQVVVNVKIIDVNLSNTQDNNASLSFGIGNNYFSSDGGAASLNIGGLNP
PSAGNVRNSLNPTVTTNPYSSGNTFLDLTQSVGPVPDTGVDTRNITINNPGGGSITETQGQDLNFVQRRAGISGDPFETG
ITAVTQGTPNIIRRTTTTDPTTGAVTETTTVTEGTRGSITAALPSLFQYPKRLLANLQAQVTNGNAKILTDPTLIVQEGQ
TANVKLTQEVVGNITSETTRGDGASTQTVTAEKTDVGLTLAVKIDRIDDNGFVSLSVAPVVKAPQSSAVINVSGNSQTIF
LVSERSLNSGMIRLRDGQTLILSGIIQDQDRTSVSKIPILGDIPLIGSLFRKTNRTNERREVIVLLTPQVMDDSQNSSYG
YNYSPSPEVRQMLERRGLNTPRR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=179, Percent_Identity=29.0502793296089, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 86825; Mature: 86825

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVHGNGLVLGAAAFVFLAAQPVSAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTT
CCEECCCCEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEE
KRGKALVADIINTQLRLPQGNNFRQDKPAAGIASVEVVQLDANSIRVIVTGDSDAPTSQP
CCCCCCEEEHHCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCC
VIRQQDGITLSLTPSTGTTASAPVTPRPPVSTTPPASTPAQTGVVPNVLVPNPQVTIDGK
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEECCCCEEEECCC
PAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
CCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHCCCHHHCCCCHH
EVLSLLARAANLNLAYISDGVGGTPAAGGQGISQTISLDIENEPVQDVFNYVLRLSGLEA
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
NRSNRTIFVGPKLPNSTRDVVMRNLRLNQVNVGVALNFLVGLGAETAVSRERQVTNVNAV
CCCCCEEEECCCCCCCHHHHHHHHCEEEEEECCEEEEEHHHCCCHHHHHCCHHHEECCEE
PVGTGVAPITQTQTTTETRVETQRINFQDSNPLLRGLQALGDERTNSLTLIGPPKLVEMA
ECCCCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHH
MNQLTQLDIRRRQVVVNVKIIDVNLSNTQDNNASLSFGIGNNYFSSDGGAASLNIGGLNP
HHHHHHHHCCEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEECCCCCEEEEEECCCCC
PSAGNVRNSLNPTVTTNPYSSGNTFLDLTQSVGPVPDTGVDTRNITINNPGGGSITETQG
CCCCCCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCC
QDLNFVQRRAGISGDPFETGITAVTQGTPNIIRRTTTTDPTTGAVTETTTVTEGTRGSIT
CCCHHHHHHCCCCCCCCCCCCEEEECCCCHHEEECCCCCCCCCCEEEEEEECCCCCCCHH
AALPSLFQYPKRLLANLQAQVTNGNAKILTDPTLIVQEGQTANVKLTQEVVGNITSETTR
HHHHHHHHHHHHHHHCCEEEEECCCEEEEECCEEEEECCCCCCEEEEHHHHCCCCCCCCC
GDGASTQTVTAEKTDVGLTLAVKIDRIDDNGFVSLSVAPVVKAPQSSAVINVSGNSQTIF
CCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECEEECCCCCEEEEECCCCEEEE
LVSERSLNSGMIRLRDGQTLILSGIIQDQDRTSVSKIPILGDIPLIGSLFRKTNRTNERR
EEECCCCCCCEEEEECCCEEEEEEEECCCCCCCHHCCCEEECCHHHHHHHHHCCCCCCCE
EVIVLLTPQVMDDSQNSSYGYNYSPSPEVRQMLERRGLNTPRR
EEEEEECCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKHVHGNGLVLGAAAFVFLAAQPVSAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTT
CCEECCCCEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEEE
KRGKALVADIINTQLRLPQGNNFRQDKPAAGIASVEVVQLDANSIRVIVTGDSDAPTSQP
CCCCCCEEEHHCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCC
VIRQQDGITLSLTPSTGTTASAPVTPRPPVSTTPPASTPAQTGVVPNVLVPNPQVTIDGK
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEECCCCEEEECCC
PAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
CCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHCCCHHHCCCCHH
EVLSLLARAANLNLAYISDGVGGTPAAGGQGISQTISLDIENEPVQDVFNYVLRLSGLEA
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCC
NRSNRTIFVGPKLPNSTRDVVMRNLRLNQVNVGVALNFLVGLGAETAVSRERQVTNVNAV
CCCCCEEEECCCCCCCHHHHHHHHCEEEEEECCEEEEEHHHCCCHHHHHCCHHHEECCEE
PVGTGVAPITQTQTTTETRVETQRINFQDSNPLLRGLQALGDERTNSLTLIGPPKLVEMA
ECCCCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHH
MNQLTQLDIRRRQVVVNVKIIDVNLSNTQDNNASLSFGIGNNYFSSDGGAASLNIGGLNP
HHHHHHHHCCEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCEECCCCCEEEEEECCCCC
PSAGNVRNSLNPTVTTNPYSSGNTFLDLTQSVGPVPDTGVDTRNITINNPGGGSITETQG
CCCCCCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCC
QDLNFVQRRAGISGDPFETGITAVTQGTPNIIRRTTTTDPTTGAVTETTTVTEGTRGSIT
CCCHHHHHHCCCCCCCCCCCCEEEECCCCHHEEECCCCCCCCCCEEEEEEECCCCCCCHH
AALPSLFQYPKRLLANLQAQVTNGNAKILTDPTLIVQEGQTANVKLTQEVVGNITSETTR
HHHHHHHHHHHHHHHCCEEEEECCCEEEEECCEEEEECCCCCCEEEEHHHHCCCCCCCCC
GDGASTQTVTAEKTDVGLTLAVKIDRIDDNGFVSLSVAPVVKAPQSSAVINVSGNSQTIF
CCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECEEECCCCCEEEEECCCCEEEE
LVSERSLNSGMIRLRDGQTLILSGIIQDQDRTSVSKIPILGDIPLIGSLFRKTNRTNERR
EEECCCCCCCEEEEECCCEEEEEEEECCCCCCCHHCCCEEECCHHHHHHHHHCCCCCCCE
EVIVLLTPQVMDDSQNSSYGYNYSPSPEVRQMLERRGLNTPRR
EEEEEECCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]