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The map label for this gene is ygbT [H]

Identifier: 16766244

GI number: 16766244

Start: 3078537

End: 3079457

Strand: Reverse

Name: ygbT [H]

Synonym: STM2938

Alternate gene names: 16766244

Gene position: 3079457-3078537 (Counterclockwise)

Preceding gene: 16766245

Following gene: 16766243

Centisome position: 63.4

GC content: 55.7

Gene sequence:

>921_bases
GTGACGTTCGTGCCGCTCAACCCGATCCCGTTAAAAGATCGAACCTCAATGATCTTCCTCCAGTACGGTCAGATTGACGT
GCTGGATGGGGCATTCGTGCTGATCGATAAAACGGGAATCCGCACGCATATTCCCGTTGGTTCGGTCGCTTGTATCATGC
TGGAACCGGGAACGCGGGTTTCCCATGCGGCTGTGCGTCTGGCATCGACGGTGGGAACGCTGTTGGTGTGGGTGGGCGAG
GCGGGAGTGCGGGTTTATTCCTCCGGACAACCCGGCGGCGCACGAGCCGATAAGTTGCTTTATCAGGCAAAGCTGGCGTT
AGATGATGACCTGCGGCTGAAGGTGGTGCGCAAAATGTATGAACTGCGTTTTCGCGAACCGCCGCCCGCCCGTCGTTCCG
TTGAGCAACTGCGCGGTATTGAAGGATCCCGTGTGCGGGCGACCTATGCATTGCTGGCGAAGCAGTATGGCGTGAAGTGG
CATGGTCGTAACTATGATCCGAAAGACTGGGAGAAGGGGGATGTCGTCAACCGATGTATTAGCGCGGCGACATCGTGCCT
GTACGGGATTTCAGAAGCGGCTATCCTGGCGGCGGGATATGCGCCAGCTATCGGTTTTATCCATAGTGGTAAGCCGCTTT
CTTTTGTTTATGACATTGCCGATATCATCAAATTTGAATCGGTGGTGCCCAAAGCATTTGAGATCGCTGCTCGTCACCCG
GCGGAACCTGATAAAGAAGTGCGCCTGGCCTGCCGTGATATTTTTCGCAGTTCGAAGCTGACCGGAAAATTGATCCCACT
GATCGAAGAGGTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCGGAAC
CTGAATCACTGGGTGATAGCGGCCATCGGGGGCATGGTTGA

Upstream 100 bases:

>100_bases
TTAACGAACCCGCGCTTTTCCTGCAACGTCTGGCGCAGGGGTTCGGTAAAAGCCGGGCGTTTGGCTGCGGAATGATGATG
ATCAAACCTGGAGACGACGC

Downstream 100 bases:

>100_bases
TGAGTATGGTGGTTGTGGTCACGGAAAACGTACCGCCGCGCCTGCGGGGACGTCTTGCCGTCTGGTTACTCGAGGTTCGT
GCAGGTGTTTATGTTGGCGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGE
AGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKW
HGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHP
AEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG

Sequences:

>Translated_306_residues
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGE
AGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKW
HGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHP
AEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>Mature_305_residues
TFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEA
GVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWH
GRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPA
EPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=303, Percent_Identity=86.1386138613861, Blast_Score=538, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33386; Mature: 33255

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMY
HHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCI
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHH
SAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHP
HHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCC
AEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC
GHRGHG
CCCCCC
>Mature Secondary Structure 
TFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMY
HHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
ELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCI
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHH
SAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHP
HHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCC
AEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC
GHRGHG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]