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The map label for this gene is ygbF [H]

Identifier: 16766243

GI number: 16766243

Start: 3078244

End: 3078540

Strand: Reverse

Name: ygbF [H]

Synonym: STM2937

Alternate gene names: 16766243

Gene position: 3078540-3078244 (Counterclockwise)

Preceding gene: 16766244

Following gene: 16766241

Centisome position: 63.38

GC content: 49.16

Gene sequence:

>297_bases
TTGATGAGTATGGTGGTTGTGGTCACGGAAAACGTACCGCCGCGCCTGCGGGGACGTCTTGCCGTCTGGTTACTCGAGGT
TCGTGCAGGTGTTTATGTTGGCGATACCTCGAAGCGTATTCGGGAAATGATTTGGCAACAGATCACACAGCTTGGCGGAG
TCGGAAACGTAGTAATGGCCTGGGCAACAAATACTGAGTCTGGTTTTGAGTTCCAGACCTGGGGTGAAAACAGACGTATT
CCGGTAGATTTGGATGGACTGCGTTTGGTTTCTTTTCTTCCTGTTGAAAATCAATAA

Upstream 100 bases:

>100_bases
CTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCGGAACCTGAATCACTGGGTGAT
AGCGGCCATCGGGGGCATGG

Downstream 100 bases:

>100_bases
GTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAAGGGCTTTTAGAACA
AATATATAGTTTTAGTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MMSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRI
PVDLDGLRLVSFLPVENQ

Sequences:

>Translated_98_residues
MMSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRI
PVDLDGLRLVSFLPVENQ
>Mature_98_residues
MMSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRI
PVDLDGLRLVSFLPVENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=84.0425531914894, Blast_Score=160, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11117; Mature: 11117

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMA
CCEEEEEEECCCCHHHHHHHHEEEEEHHCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
WATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
EECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MMSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMA
CCEEEEEEECCCCHHHHHHHHEEEEEHHCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
WATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
EECCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]