| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763724
Identifier: 16763724
GI number: 16763724
Start: 388783
End: 389526
Strand: Direct
Name: 16763724
Synonym: STM0344
Alternate gene names: NA
Gene position: 388783-389526 (Clockwise)
Preceding gene: 16763723
Following gene: 16763725
Centisome position: 8.0
GC content: 40.86
Gene sequence:
>744_bases ATGAGTCAGAACAATTATCTGATTGACAAAAGGGTTATTCTTGATTGTGAACGAATGACGCTTTCCTGCGCCGGAGAGTC GATAACGATATCTGAATCGGAACGCAGTTTGCTTATCGCTTTTTATGAAGGCCTTTTTAAAAAAGATGATTTAATTAACT ATGTCTGGGGGCGCAAAGGTGTCGTGGTCTCTGATGCCAGTTATTATAAATTGATTAACCAGCTACGAGGGTCATTTGAT AAAATTGGTCTTAAGGGGGCGTCTGTTGTGACTCGCCCTCGCGTGGGTGTTTTACTCTCAGTTTCCATTGAACCGTTGAG TGATGAGGCGCAAAATACGCCGTTGCCTGCTGTTGCTGAAACAGAAGTATCGACGGTTGAAGTGCGGCACGATGACACTA TTATTACCCCAACACCGGGCGCTGTGAATAAAAAAGATTGGCTCTACTTTTGCCTGGCCGCGCTTCTGATGTTTTTTATG ATGTATAAAGTTAAGGGTGAAAATATTGATTACTTTACCCTCCAGGGTTCGTATGATGGATACACTTTTTATAGTGTCGG GCATGATAAAACCCATCTGACGGATATCGTTGAAGCGTACTCTGAGATGAGTAATGAAATACATAAACAAAACGGAAAAA TCATTTATTACATTCGTGTGCCTAACACAAATATTTTTGTCCAGTGTCTTAACCAACTTGATATAGCGGAGCCGAAATGC ATTTCCATAAAAGAACGTTATTAA
Upstream 100 bases:
>100_bases ATGCAGGAACTCGCTACGGAAAAAAATTCAATAGCACGATATATCCTGGTAATATGTTTATGCCGTGAAGAAACGTGATA GCACTGGGGCGGATATTTTT
Downstream 100 bases:
>100_bases GCGTGGCGACGCTTGGTATGCTGGCTGTTTCAGTCGTACTGATGGTAGTTTGGGTACGAAACAGTAACCATAGTTCTATT AATACTAATGAATTTTTATG
Product: response regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Inner Membrane Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETEVSTVEVRHDDTIITPTPGAVNKKDWLYFCLAALLMFFM MYKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY
Sequences:
>Translated_247_residues MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETEVSTVEVRHDDTIITPTPGAVNKKDWLYFCLAALLMFFM MYKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY >Mature_246_residues SQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDK IGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETEVSTVEVRHDDTIITPTPGAVNKKDWLYFCLAALLMFFMM YKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKCI SIKERY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28032; Mature: 27901
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKG CCCCCEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCEEC TEVSTVEVRHDDTIITPTPGAVNKKDWLYFCLAALLMFFMMYKVKGENIDYFTLQGSYDG CCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC YTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC >Mature Secondary Structure SQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKG CCCCEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCEEC TEVSTVEVRHDDTIITPTPGAVNKKDWLYFCLAALLMFFMMYKVKGENIDYFTLQGSYDG CCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC YTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA