| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763725
Identifier: 16763725
GI number: 16763725
Start: 389499
End: 389987
Strand: Direct
Name: 16763725
Synonym: STM0345
Alternate gene names: NA
Gene position: 389499-389987 (Clockwise)
Preceding gene: 16763724
Following gene: 16763726
Centisome position: 8.02
GC content: 39.26
Gene sequence:
>489_bases ATGCATTTCCATAAAAGAACGTTATTAAGCGTGGCGACGCTTGGTATGCTGGCTGTTTCAGTCGTACTGATGGTAGTTTG GGTACGAAACAGTAACCATAGTTCTATTAATACTAATGAATTTTTATGTACGACAAGAACGGTAACGACGATACAGCCTA AAGATATCCATGCCGATGGCAGTCTTGTTCTTGATTTTAAGATGAAGAGAATTACGTTTCAATATGAAATAAAAACAAAA GATAACGGTGTAAAAATATTATACCGGGACGTGTATATGAAAAATTTACATCGAACAGCGCCTGGTGTTTATACGTTCGA AGTATCCCAGGTAAAAGTCTTTGCCACGGATACGGCTGGCGAGCTGTTATCACATTTACGGGTTTTGCATCCGGAAGCGG CTAATGAGATTCGAATATCTAAAGTGGGTGAGAAAACCTTTTTCTATTCTCTTAATCGGCAGCTTTATAACGTTTGTACC GCGCAGTAG
Upstream 100 bases:
>100_bases AAATACATAAACAAAACGGAAAAATCATTTATTACATTCGTGTGCCTAACACAAATATTTTTGTCCAGTGTCTTAACCAA CTTGATATAGCGGAGCCGAA
Downstream 100 bases:
>100_bases ATCTGAATGTTGTCTGAATGCGTCAGAAAGCGAGTTGCGAAATTGCCCTCCGCAAGGGTAAAGGTTAACTCGAACACCAG TTAAAGAGCATAAAAACAAT
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITFQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGELLSHLRVLHPEAANEIRISKVGEKTFFYSLNRQLYNVCT AQ
Sequences:
>Translated_162_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITFQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGELLSHLRVLHPEAANEIRISKVGEKTFFYSLNRQLYNVCT AQ >Mature_162_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITFQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGELLSHLRVLHPEAANEIRISKVGEKTFFYSLNRQLYNVCT AQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18523; Mature: 18523
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECEEEEECCCCCCCCC SLVLDFKMKRITFQYEIKTKDNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAG CEEEEEEEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEEEEEEEEEECCHH ELLSHLRVLHPEAANEIRISKVGEKTFFYSLNRQLYNVCTAQ HHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECEEEEECCCCCCCCC SLVLDFKMKRITFQYEIKTKDNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAG CEEEEEEEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEEEEEEEEEECCHH ELLSHLRVLHPEAANEIRISKVGEKTFFYSLNRQLYNVCTAQ HHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA