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The map label for this gene is safA

Identifier: 16763682

GI number: 16763682

Start: 342209

End: 342721

Strand: Direct

Name: safA

Synonym: STM0299

Alternate gene names: NA

Gene position: 342209-342721 (Clockwise)

Preceding gene: 16763680

Following gene: 16763683

Centisome position: 7.05

GC content: 42.88

Gene sequence:

>513_bases
GTGGTTATTCAAATGAAAAGCATAAAAAAATTGATTATCGCAAGTGCGTTGAGCATGATGGCTGCTAGTTGTTATGCTGG
CTCATTTTTGCCGAACTCAGAGCAACAAAAATCAGTGGATATTGTGTTTTCCTCTCCCCAAGATTTAACCGTATCGCTTA
TTCCAGTGTCGGGCTTAAAGGCTGGGAAAAATGCTCCTAGCGCGAAAATTGCGAAGCTTGTAGTTAATTCTACTACTCTT
AAAGAATTCGGGGTCAGGGGGATTTCTAACAACGTGGTAGACAGTACTGGCACTGCATGGCGTGTAGCTGGTAAAAATAC
TGGTAAAGAGATCGGTGTGGGCTTATCAAGTGACAGTCTTAGAAGATCTGATAGCACGGAAAAATGGAATGGGGTGAACT
GGATGACCTTTAATAGCAATGACACACTTGATATTGTCCTGACAGGACCGGCGCAGAATGTCACAGCTGACACGTACCCA
ATAACTTTAGACGTAGTGGGATATCAACCTTAA

Upstream 100 bases:

>100_bases
AGCTGTTATTACCAGCCACGGATTTTTTACATACGGTAAGATTTGGTATGGCGTTATGTATTCTGGATGTGCTGGATTAT
TTTAATTTGGTTTAAAAAAG

Downstream 100 bases:

>100_bases
TAGTAAACAACTATTAGTGTATTGTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTT
GATATGAAAATAGTTAATTT

Product: outer membrane protein

Products: NA

Alternate protein names: Spora Coat Assembly Protein SafA; Outer Membrane Protein; Saf-Pilin Pilus Formation Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MVIQMKSIKKLIIASALSMMAASCYAGSFLPNSEQQKSVDIVFSSPQDLTVSLIPVSGLKAGKNAPSAKIAKLVVNSTTL
KEFGVRGISNNVVDSTGTAWRVAGKNTGKEIGVGLSSDSLRRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYP
ITLDVVGYQP

Sequences:

>Translated_170_residues
MVIQMKSIKKLIIASALSMMAASCYAGSFLPNSEQQKSVDIVFSSPQDLTVSLIPVSGLKAGKNAPSAKIAKLVVNSTTL
KEFGVRGISNNVVDSTGTAWRVAGKNTGKEIGVGLSSDSLRRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYP
ITLDVVGYQP
>Mature_170_residues
MVIQMKSIKKLIIASALSMMAASCYAGSFLPNSEQQKSVDIVFSSPQDLTVSLIPVSGLKAGKNAPSAKIAKLVVNSTTL
KEFGVRGISNNVVDSTGTAWRVAGKNTGKEIGVGLSSDSLRRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYP
ITLDVVGYQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18043; Mature: 18043

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIQMKSIKKLIIASALSMMAASCYAGSFLPNSEQQKSVDIVFSSPQDLTVSLIPVSGLK
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
AGKNAPSAKIAKLVVNSTTLKEFGVRGISNNVVDSTGTAWRVAGKNTGKEIGVGLSSDSL
CCCCCCHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCC
RRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYPITLDVVGYQP
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MVIQMKSIKKLIIASALSMMAASCYAGSFLPNSEQQKSVDIVFSSPQDLTVSLIPVSGLK
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
AGKNAPSAKIAKLVVNSTTLKEFGVRGISNNVVDSTGTAWRVAGKNTGKEIGVGLSSDSL
CCCCCCHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCC
RRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYPITLDVVGYQP
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA