Click here to switch to the map view.

The map label for this gene is 16763680

Identifier: 16763680

GI number: 16763680

Start: 340755

End: 340952

Strand: Direct

Name: 16763680

Synonym: STM0297

Alternate gene names: NA

Gene position: 340755-340952 (Clockwise)

Preceding gene: 16763678

Following gene: 16763682

Centisome position: 7.02

GC content: 52.53

Gene sequence:

>198_bases
ATGCGTAAAGCCCGTATTACTGCGCACCAGATCATCGCTGTGATTAGATCAGTCGAATCCGGACGGACTGTTAAAGATGT
CTACCGGGAGGCCGGTATTTCTGAAGCCACCAGGGACAACTGGAGGTCTGGATACGGCGGCAGGGATACGCGTGGAATCA
CAAAAGGCTCCACCGTATTTACTGTCTGCTCAAGCTGA

Upstream 100 bases:

>100_bases
AAGTCTCTCAACGCGTGAGTATGTAAGTATCCCGCATAATCGAGCCATTCACATTTAGAGATCATCCGACATAATCAATC
TGCCAACGCAGGAGATCGCT

Downstream 100 bases:

>100_bases
ATTTTCGCCGTAAGGGTAAACAACGGCTGCCGGTACGCAATCCCTCGCCACTGGTCACGCCGGAAGCGCTGAACCAGAGC
TGGTCTGTGGGCGTCGTTTT

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDTRGITKGSTVFTVCSS

Sequences:

>Translated_65_residues
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDTRGITKGSTVFTVCSS
>Mature_65_residues
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDTRGITKGSTVFTVCSS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7160; Mature: 7160

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDTRGITKGSTVF
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
TVCSS
EEECC
>Mature Secondary Structure
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDTRGITKGSTVF
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
TVCSS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA