| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930957
Identifier: 218930957
GI number: 218930957
Start: 4458138
End: 4458821
Strand: Reverse
Name: 218930957
Synonym: YPO3961
Alternate gene names: NA
Gene position: 4458821-4458138 (Counterclockwise)
Preceding gene: 218930958
Following gene: 218930956
Centisome position: 95.81
GC content: 51.02
Gene sequence:
>684_bases ATGAAACGCTCCGAGGTCAACCAAATCCTTAAGCAGACCGGTCATTTCTTTGCCCGACACCATATCCAGCTACCGCCATT TGCCCGTTTCACGCCACAAAGATGGCAACAGCTTGACCCTAAAGCCTGGCAAGAACTGTTTGACCTGAAACTCGGCTGGG ATATTACCGCATTCGGCGGGAACCATTTTTTTACTCAGGGATTAACGCTGTTCACCTTACGCAACGGTTCGGTAAGCGGC ACTCCTTACCCTAAATGCTACGCCGAAAAAATCATGCACGTCCGCGAAGGCCAGGTGACACCTATGCATTTTCACTGGCG TAAACAGGAAGATATCATCAACCGTGGCGGCGGCAATCTTATCGTCGAGCTATGGAATTCCGACGCGTTTGAACAAACGG AGAAGAGCGATGTCACCGTGACACTCGACGGCTGCCGCCAAACCCATGCGGCAGGCAGCCAGTTACGCTTATCTCCCGGT GAAAGTATTTGCCTGGTGCCTGGGGTGTACCACAGTTTCTGGGGCGAGGTAGGTTACGGTGAGGTGCTGGTCGGTGAGGT ATCGATGGTAAATGACGATGACCACGACAACCGATTTATGAAACCTCTTGAACGTTTTAATTCGATTATTGAAGACGAAC CGGCTGAACTTGTGCTGTGTAATGAGTACTGCCGTTTCGTCTGA
Upstream 100 bases:
>100_bases CTTACAAAGGCTGGACGATGAAATAACAGCTCGCCTCACTTCGGCTCGGTCTAATCCTCTCTCCCTATTAAGGAGAGGGG CAACTTTTTGAGGAGATTTT
Downstream 100 bases:
>100_bases ATTTGCCAACACCAGGAGAACGACTATGGCTTTGATTTCCCTTGCAAATGGCCTGGCTCATGCCAGGAAAAACGGTTACG CATTGGGTGCCTTTAACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAELVLCNEYCRFV
Sequences:
>Translated_227_residues MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAELVLCNEYCRFV >Mature_227_residues MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGGNHFFTQGLTLFTLRNGSVSG TPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNLIVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPG ESICLVPGVYHSFWGEVGYGEVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAELVLCNEYCRFV
Specific function: Unknown
COG id: COG3822
COG function: function code R; ABC-type sugar transport system, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26100; Mature: 26100
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECC NHFFTQGLTLFTLRNGSVSGTPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNL CEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCEE IVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPGESICLVPGVYHSFWGEVGYG EEEECCCCCCCCCCCCCEEEEECCCCCHHCCCCEEEECCCCCEEECCCHHHHHHCCCCCC EVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAELVLCNEYCRFV EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHCCC >Mature Secondary Structure MKRSEVNQILKQTGHFFARHHIQLPPFARFTPQRWQQLDPKAWQELFDLKLGWDITAFGG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECC NHFFTQGLTLFTLRNGSVSGTPYPKCYAEKIMHVREGQVTPMHFHWRKQEDIINRGGGNL CEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCEE IVELWNSDAFEQTEKSDVTVTLDGCRQTHAAGSQLRLSPGESICLVPGVYHSFWGEVGYG EEEECCCCCCCCCCCCCEEEEECCCCCHHCCCCEEEECCCCCEEECCCHHHHHHCCCCCC EVLVGEVSMVNDDDHDNRFMKPLERFNSIIEDEPAELVLCNEYCRFV EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA