Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928785
Identifier: 218928785
GI number: 218928785
Start: 1875886
End: 1876788
Strand: Reverse
Name: 218928785
Synonym: YPO1650
Alternate gene names: NA
Gene position: 1876788-1875886 (Counterclockwise)
Preceding gene: 218928786
Following gene: 218928784
Centisome position: 40.33
GC content: 47.62
Gene sequence:
>903_bases TTGATGTGTATTGATAAACCAGAGTCAGATCCGCTGATCCTTACACTTCCTAACACGCGCTGGGACCAGAATGCAGAGGA TAATACCGGTGCCATTGAGGCACTTGAGCAAGGTAAAGTCCTGTTCTTACCTCACCTGACTTTTGAACTGAGTGAGCAGG AAAAACAGTTACTGGACCCTACCCTGGTTGATGTTAAACGCAAGAATATCAGTTTCAAACCGTTAGAAGGTGTATTAACT GGCGTGACTGATGCAAGCAAAATCGCATTAACCCGCCAGTTATTGGATCGTTATTATCAAAGTTGCCTCAGTTTGGTACA GCAACTCCTCCCGGTCTATACGCATGCGCTACACAGCCCGACCAATAGCTTGAGATTACACCCTGTGGCCGCCTGGCGCG ACAGTACGTCATGGCGTAAAGATGATAGCCGCTTACATGTAGATGCTTTCCCGTCACGCCCAAACTACGGTGAGCGTATC ATCCGCATATTCACCAATATTAACCCGCATGGTGAAGCGCGTTCCTGGCGTGTCGGTGAAGATTTTACACAACTTGCCAG CCGCTATTTGCCACAACTGGATAGCTATTCATCGCTCAGCAGTTGGTTGCAACATAAAATCGGTATCACCAAGCGCCCCC GTAGCCATTACGACCATCTGATGCTCCAACTGCATGACAAAATGAAGGCCGATCTCGCTTATCAAAAAGATGGCTTACAA CAGGCCATTGAGTTCCCACCAGGCAGCAGTTGGATATGCTTTTCGGATCAAACACCTCATGCGGCGATGGGCGGACAATT TATGTTGGAGCAAACGTTACTACTACCTGTTGAAGGAATGAAATCCTCCCAGCGCTCACCACTGAAAATACTGGAAGCGT TGACACAAAAAACGCTGATATAA
Upstream 100 bases:
>100_bases ATAAAAATATAAAAAGCGGAAGTGAGCATCTCAAGCCTCACGTTACCTATAATAAAGGGTTATTATTGACAGAATTATAT TGATATTTAGGAGCAGATCT
Downstream 100 bases:
>100_bases GTGGCCACATAGCGTCTAACTCCCTCACTAACCCTATGGGGGAGTTAATAGACTAAGGCTCACGCGCCTGCCTGATATAC CCCGCCAACTAATCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLT GVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERI IRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQ QAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI
Sequences:
>Translated_300_residues MMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLT GVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERI IRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQ QAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI >Mature_300_residues MMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLT GVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERI IRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQ QAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34227; Mature: 34227
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDP CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCH TLVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSP HHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGE CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH DFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI HHHCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDP CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCH TLVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSP HHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGE CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH DFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI HHHCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA