Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is ydfZ [C]
Identifier: 218928784
GI number: 218928784
Start: 1875380
End: 1875595
Strand: Reverse
Name: ydfZ [C]
Synonym: YPO1649
Alternate gene names: 218928784
Gene position: 1875595-1875380 (Counterclockwise)
Preceding gene: 218928785
Following gene: 218928781
Centisome position: 40.3
GC content: 46.3
Gene sequence:
>216_bases GTGGAGGCTAATATGGTCAAAGTCTATGATAGAAATAGAAACCAAATTGTCCCAGGGCAACGCGTGATGATCGCACAATC TGGGGTGATTGATGTGGCAAAAGCCATTCATGCTGACGGAATGTCTGCCGTACAAGCAGAGCGGGAGAAGGTTGTCGAGT TACTGCATACCGGTGAACGCCACGTTCCTTTTGATTTAGTGAGACTAGGTTTATAA
Upstream 100 bases:
>100_bases GTTTATTTCATCAAGCGTATCCTACGTAAGGAGATGCTTTAAGATATAGATCTTAAGCGTGTATCCCTACGTGTACAGTT ATTAGGCCCTATCAGATAAA
Downstream 100 bases:
>100_bases GCATATCATTTTAATTTCATCACAAGATTATTTTAGTTTCATCACATTAGCCTAGGCTTATAGCCACCGATTAAAACAGC GGTTTCCGATTAACCGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MEANMVKVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGERHVPFDLVRLGL
Sequences:
>Translated_71_residues MEANMVKVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGERHVPFDLVRLGL >Mature_71_residues MEANMVKVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGERHVPFDLVRLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7908; Mature: 7908
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANMVKVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGER CCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC HVPFDLVRLGL CCCHHHHEECC >Mature Secondary Structure MEANMVKVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGER CCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC HVPFDLVRLGL CCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA