Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928410
Identifier: 218928410
GI number: 218928410
Start: 1413073
End: 1413435
Strand: Reverse
Name: 218928410
Synonym: YPO1255
Alternate gene names: NA
Gene position: 1413435-1413073 (Counterclockwise)
Preceding gene: 218928411
Following gene: 218928387
Centisome position: 30.37
GC content: 35.26
Gene sequence:
>363_bases ATGACATCAGCAATTAAAATAACTGTTGGTTATCACAGTTTCTTGCTTCCTGACACCCATACTGATTACGCCTTCCCAGC TTACATCAACAAACATATTGATCTTATTTGGCGCTATATAGAAAATAACGACAAGATAGAAGAGTTGTCTTCAAATCCTT TCTCAAAGGGTAGGACCGCAGTATTAGTCAAAGCAAAGTTTCTCTCAAGTGAACTTAAAGAGTTTAAATTAAAAACTGGG ATAATAGGTTATCCTTTTGATATGAAAGATATTAGTTTATATCTCGCATCTCAAAATATAAAAATCACGCTATGCACGGA GTTTAAACGGAATGGGACGTTAGTTAACAGCCTCCCCTCATAA
Upstream 100 bases:
>100_bases TGATTTACATCACTTGCTATTATATTCAAATGTCGGTGAATATAATGATTGTTATGACGTGTTAATTGCCAAAACATCGT TTACCACCAAGGATGATAGA
Downstream 100 bases:
>100_bases CATCTATACTCTAAATAAAAGGAAGGCGCTTTAGGCGTTATGAGTAACAAGGTAAAAACCGCTCACCAAAGGGTGAACGG CCTTCTTGAATTCAAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTSAIKITVGYHSFLLPDTHTDYAFPAYINKHIDLIWRYIENNDKIEELSSNPFSKGRTAVLVKAKFLSSELKEFKLKTG IIGYPFDMKDISLYLASQNIKITLCTEFKRNGTLVNSLPS
Sequences:
>Translated_120_residues MTSAIKITVGYHSFLLPDTHTDYAFPAYINKHIDLIWRYIENNDKIEELSSNPFSKGRTAVLVKAKFLSSELKEFKLKTG IIGYPFDMKDISLYLASQNIKITLCTEFKRNGTLVNSLPS >Mature_119_residues TSAIKITVGYHSFLLPDTHTDYAFPAYINKHIDLIWRYIENNDKIEELSSNPFSKGRTAVLVKAKFLSSELKEFKLKTGI IGYPFDMKDISLYLASQNIKITLCTEFKRNGTLVNSLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13680; Mature: 13549
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAIKITVGYHSFLLPDTHTDYAFPAYINKHIDLIWRYIENNDKIEELSSNPFSKGRTA CCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEE VLVKAKFLSSELKEFKLKTGIIGYPFDMKDISLYLASQNIKITLCTEFKRNGTLVNSLPS EEEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCCC >Mature Secondary Structure TSAIKITVGYHSFLLPDTHTDYAFPAYINKHIDLIWRYIENNDKIEELSSNPFSKGRTA CCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEE VLVKAKFLSSELKEFKLKTGIIGYPFDMKDISLYLASQNIKITLCTEFKRNGTLVNSLPS EEEEEHHHHHHHHHHHHHCCEEECCCCCCCEEEEEECCCEEEEEEECCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA