Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928411
Identifier: 218928411
GI number: 218928411
Start: 1414135
End: 1414623
Strand: Reverse
Name: 218928411
Synonym: YPO1257
Alternate gene names: NA
Gene position: 1414623-1414135 (Counterclockwise)
Preceding gene: 218928412
Following gene: 218928410
Centisome position: 30.4
GC content: 39.06
Gene sequence:
>489_bases ATGACCCAGCTTAATAACATTGTGGATGAGCTTAATTCATTGGCTCTAAAGTTAGAATATGACGTTCTTCCACCAGCCGT GTTTCCGTCTTCACTCTATGAATATGATTTTGGACTAAAGATAGGTAAAGCACCTCAAGAATTTTGGGATCAATATAAGG CGCTTGTAGAACTCGCTGATGGTTTCGATTTGGATGGTTTTCGTATGTATGGAATTGAAAAACATGGGGATTATGAAAAT GATTTGTTTACTTATAATGGCTATAAGGCCCGCTTAGACAAGGAGGCCCCATCGTTAATGAGCGATGAAAGTCGTTATTG TATAGAGATCGGTTCATCATCACTGGATACCTATACATACGATGTACGATACGGTAAATGGGAATCTAGAGATCGTGTTC AGTATGACAACCTCTTTATTTCGTGTAGTAATCTGATTGATTTTCTTGCCGCTATATTGGCAGAGATCCGTGAAGCTAAT GTCCAGTAG
Upstream 100 bases:
>100_bases TACGCAAAGCAATATAACCCGTCAAATTGGGACTAATGGAGCCAAAGAGATTTTATGGCCTGTTCCGAAAGGTGTGATTT ATCCATAAAGGATGCAGATT
Downstream 100 bases:
>100_bases TGATTATTCAGAATAATATGAATAATCAATTTAATATCTCTATAACTGGAGGTTGCTACGTAACGAGTGGCGACAAAAAT AAACGTTTAAGTTCGTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTQLNNIVDELNSLALKLEYDVLPPAVFPSSLYEYDFGLKIGKAPQEFWDQYKALVELADGFDLDGFRMYGIEKHGDYEN DLFTYNGYKARLDKEAPSLMSDESRYCIEIGSSSLDTYTYDVRYGKWESRDRVQYDNLFISCSNLIDFLAAILAEIREAN VQ
Sequences:
>Translated_162_residues MTQLNNIVDELNSLALKLEYDVLPPAVFPSSLYEYDFGLKIGKAPQEFWDQYKALVELADGFDLDGFRMYGIEKHGDYEN DLFTYNGYKARLDKEAPSLMSDESRYCIEIGSSSLDTYTYDVRYGKWESRDRVQYDNLFISCSNLIDFLAAILAEIREAN VQ >Mature_161_residues TQLNNIVDELNSLALKLEYDVLPPAVFPSSLYEYDFGLKIGKAPQEFWDQYKALVELADGFDLDGFRMYGIEKHGDYEND LFTYNGYKARLDKEAPSLMSDESRYCIEIGSSSLDTYTYDVRYGKWESRDRVQYDNLFISCSNLIDFLAAILAEIREANV Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18711; Mature: 18580
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLNNIVDELNSLALKLEYDVLPPAVFPSSLYEYDFGLKIGKAPQEFWDQYKALVELAD CCHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC GFDLDGFRMYGIEKHGDYENDLFTYNGYKARLDKEAPSLMSDESRYCIEIGSSSLDTYTY CCCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCCCHHCCCCCEEEEECCCCCCEEEE DVRYGKWESRDRVQYDNLFISCSNLIDFLAAILAEIREANVQ EEEECCCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQLNNIVDELNSLALKLEYDVLPPAVFPSSLYEYDFGLKIGKAPQEFWDQYKALVELAD CHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC GFDLDGFRMYGIEKHGDYENDLFTYNGYKARLDKEAPSLMSDESRYCIEIGSSSLDTYTY CCCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCCCHHCCCCCEEEEECCCCCCEEEE DVRYGKWESRDRVQYDNLFISCSNLIDFLAAILAEIREANVQ EEEECCCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA