| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928245
Identifier: 218928245
GI number: 218928245
Start: 1224015
End: 1224479
Strand: Direct
Name: 218928245
Synonym: YPO1076
Alternate gene names: NA
Gene position: 1224015-1224479 (Clockwise)
Preceding gene: 218928244
Following gene: 218928246
Centisome position: 26.3
GC content: 47.96
Gene sequence:
>465_bases TTGAGGTGGTTTTTTATTTTGGTGCATCCTGACGGGGCTGAAACAGGCTCGGTGAAAAGTGTGCGGATGGACATGGAGTT GCCGCCGTCAATGTGCGCGGTGATAGTAGGTACTAATCTGATGCGTGCTTATCAGCGAGTGGGAGAACAAAGGGTAGACA ACTCGATCGTTAAAAAACACGGTAACGAGGCCATGGATCTGCAATTATCAGGGTTACGGCCTGACAACGGGTCACAAGTC GAAAGCGCTGGACAAGGTAACTGCGAGGCTAGCATCGGTACTGAGAGGATGGATACGTTACTTCCGTTTAACCGAGGTGG AAGAGGGGACTGGAATAGTTGGATCGGTGGAGATAAAGAAAATTGCGTTGCCTGCTATGGCGGCAGTGGAAAAGGTCGTA TATACGAACAAAGATGCTTATTAGAAGAGGTCTTCTACAGAAAAGGACTGATATATCAGCAATAG
Upstream 100 bases:
>100_bases ATCGCCACATTGGATCGCAATGAGAGGTTGGTCAGCCCTGATGGTTTAGCACCTAAATGGGATTAATAGCAGCCTAAGAC ACTGGACGAGCCACCTTACA
Downstream 100 bases:
>100_bases ACCAACGAGGGCTGTGGTGGAACTTGGGCGCGAGTCATATGAATAAAGTGGTACGAAAGAATGACCTTGAACAGGGCGGG CTGTTATCACTGAGTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MRWFFILVHPDGAETGSVKSVRMDMELPPSMCAVIVGTNLMRAYQRVGEQRVDNSIVKKHGNEAMDLQLSGLRPDNGSQV ESAGQGNCEASIGTERMDTLLPFNRGGRGDWNSWIGGDKENCVACYGGSGKGRIYEQRCLLEEVFYRKGLIYQQ
Sequences:
>Translated_154_residues MRWFFILVHPDGAETGSVKSVRMDMELPPSMCAVIVGTNLMRAYQRVGEQRVDNSIVKKHGNEAMDLQLSGLRPDNGSQV ESAGQGNCEASIGTERMDTLLPFNRGGRGDWNSWIGGDKENCVACYGGSGKGRIYEQRCLLEEVFYRKGLIYQQ >Mature_154_residues MRWFFILVHPDGAETGSVKSVRMDMELPPSMCAVIVGTNLMRAYQRVGEQRVDNSIVKKHGNEAMDLQLSGLRPDNGSQV ESAGQGNCEASIGTERMDTLLPFNRGGRGDWNSWIGGDKENCVACYGGSGKGRIYEQRCLLEEVFYRKGLIYQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17139; Mature: 17139
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFFILVHPDGAETGSVKSVRMDMELPPSMCAVIVGTNLMRAYQRVGEQRVDNSIVKKH CEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNEAMDLQLSGLRPDNGSQVESAGQGNCEASIGTERMDTLLPFNRGGRGDWNSWIGGDKE CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC NCVACYGGSGKGRIYEQRCLLEEVFYRKGLIYQQ CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRWFFILVHPDGAETGSVKSVRMDMELPPSMCAVIVGTNLMRAYQRVGEQRVDNSIVKKH CEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNEAMDLQLSGLRPDNGSQVESAGQGNCEASIGTERMDTLLPFNRGGRGDWNSWIGGDKE CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC NCVACYGGSGKGRIYEQRCLLEEVFYRKGLIYQQ CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA