Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928075
Identifier: 218928075
GI number: 218928075
Start: 986080
End: 987225
Strand: Reverse
Name: 218928075
Synonym: YPO0901
Alternate gene names: NA
Gene position: 987225-986080 (Counterclockwise)
Preceding gene: 218928077
Following gene: 218928074
Centisome position: 21.21
GC content: 43.54
Gene sequence:
>1146_bases TTGTACAACCCGATTCTCGCTCTTGGGCATCAAAGGATCGCCATGTCATCATTTAAAACCCTGGGATTTTTCTTCCTTTC ACTGTCATTACTCTTCTCTTCCTTATTAGTGCTCTTATCTCTGCTGCTATTCGCTGGTTTATTACTGTTCCCCAGTCTCT TACCGTTCTCCCGTTTCTTGCCATTCGCTGGATTCTCTCCAGCCAGCGGATTTTCGCTAGCGACAAAATATGATGAGGGA TTTTCGGGTAATGTGAGCTATAGGGGGGATCTCAATGACAGCCCGAAAACGGACCCACTGTGGATTCCATTACCTGCGTT ACCACTTATTCAACAGGCTGTTACTGAATTAGTGCCAACGGTGCAGGGGCAGTACCAAGAGCATGTCATGAGCCAAGTGT GTGCATTAGCCCGAGGTGAGCGTACTCAGGAACAGGTTGCTCAAACACTGCGGTCATACGATATCGATATCAGCAATATT CCCCCTCAGGGACATCCTCTTTCTCTGTTGGTCAGTACCGACCAATCCAGTCGTGTCATCGGCTGTGCTGCTTATATTGC CAGTTCTGTCATGGCTATCCCTAAGTCGGATGAGTTTATGGTGAGTACTGATAAACCCGCGGATGCCTTACCAGGGAAAA AAAATGAAGCGGCAAGCAAAGAGAAAACATTGAGTATTGATCCTAAAAAATTAGCTCAATACCTTCAGACTCAATTGGCT GTAGCGAAGGCTAATGCTGATATTTTTGCAATTATTGCCGTTGAGTTAGAAAAAAAACCAGGGCTCACTGTGAATGAATA TTCGGTACAAATAAAAAAAGTATTTAGTGAAGTTGCTTCGGCCTATTTACAACGGGTCAAAGCTCTTTATGCCGTGGGGG CTGGGGTTAATTATAAATTAATTACTTACTCTGATGAGGGTTTTAAGTTCATTAGCAATGATGGTTACTTGTTTGAGTAT GGGTACGACAGCTTAAGTTTGTATTTCAACAGAATTCCTTGGTATGGCAGCGGAAAAATATTGGGGAAAGAGTATTTTTT CTCTGTTTCGTATATTGAACCGAATCTTGTAAAACGCATAAGAGAGGAGAAGCGTGAAGAGAAGAGTGAAGGGGTTCTCA ATCAAGAGAGCGGTGTTGCTCCCTGA
Upstream 100 bases:
>100_bases GATTTTGGGATTGGTGTCGGTGTAGGGTATCAGTGGTAAAGAGCGCGTTACGCCAACGCTGAATGCTATTCAGGCTGTCA CTAACGGGTTGTAGGGTGTT
Downstream 100 bases:
>100_bases ATGCTGATTTGCTGGCAGCCATCAAAACGGGCTAGTTACTTTTTATTGTTAGGGAGTAGAAACCTCTGGCAGACTTTTTT AGCGTACAGGTGTACACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MYNPILALGHQRIAMSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEG FSGNVSYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQEHVMSQVCALARGERTQEQVAQTLRSYDIDISNI PPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLA VAKANADIFAIIAVELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEY GYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP
Sequences:
>Translated_381_residues MYNPILALGHQRIAMSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEG FSGNVSYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQEHVMSQVCALARGERTQEQVAQTLRSYDIDISNI PPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLA VAKANADIFAIIAVELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEY GYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP >Mature_381_residues MYNPILALGHQRIAMSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEG FSGNVSYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQEHVMSQVCALARGERTQEQVAQTLRSYDIDISNI PPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLA VAKANADIFAIIAVELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEY GYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRIREEKREEKSEGVLNQESGVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42060; Mature: 42060
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNPILALGHQRIAMSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFL CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC PFAGFSPASGFSLATKYDEGFSGNVSYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPT CCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH VQGQYQEHVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVI HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHH GCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLA HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH VAKANADIFAIIAVELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKL HHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRI EEECCCCCEEECCCCEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEECCCHHHHHHH REEKREEKSEGVLNQESGVAP HHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MYNPILALGHQRIAMSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFL CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC PFAGFSPASGFSLATKYDEGFSGNVSYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPT CCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH VQGQYQEHVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVI HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHH GCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLA HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH VAKANADIFAIIAVELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKL HHHCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLVKRI EEECCCCCEEECCCCEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEECCCHHHHHHH REEKREEKSEGVLNQESGVAP HHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA