Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928077
Identifier: 218928077
GI number: 218928077
Start: 990473
End: 990910
Strand: Reverse
Name: 218928077
Synonym: YPO0904
Alternate gene names: NA
Gene position: 990910-990473 (Counterclockwise)
Preceding gene: 218928078
Following gene: 218928075
Centisome position: 21.29
GC content: 42.24
Gene sequence:
>438_bases ATGATAAATAATCGATTCATCGGCAGTTGGTCATTGATTTCTCAGCATTTTATTTTACCGGATAACAGTATCCACTACCC GATGGGACAAAACATGTTGGGGCGTATTAATTATGAAAAACAGGGCACAATGGCGGCACAACTTTATCGTGGTGACCGGG CCAAATTTACTACGGAAGACTGGTTACAGGGCAGTGATAGCGAAATTAAAAATGCCTTTCTTACCGCCCTGACTTACTTT GGCCGCTATCATATTGATGAGGAACAGGGCATCGTGACCCATACTGTTGAAGGCTGCTTGTTCCCTAACTGGGTTGGTAA CCAGCAGATTCGACATTATCAATTTGAAGAAGATCGTTTAACGTTACGCACACCGCCATTGCAAATGAATAATTCATCGC TGGTGGGGGTATTAATTTGGCAAAAAGTGAAAAAATAG
Upstream 100 bases:
>100_bases CCTTTCCGTCTTACCTTCCCGCCTCAGGTGACTATTTGTATCCCTCCAATCAATGACTATGCTTATTAATGGGATATAAA GAATCATAATAGGAGGCATT
Downstream 100 bases:
>100_bases CGATGGACTGTTTATATACATAAGAATGTTGCACTTGTTACTGGTGGTAGCCGGGGGATTGGGCGGGCTACCGCACTATT GCTGGCCAAACATGGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MINNRFIGSWSLISQHFILPDNSIHYPMGQNMLGRINYEKQGTMAAQLYRGDRAKFTTEDWLQGSDSEIKNAFLTALTYF GRYHIDEEQGIVTHTVEGCLFPNWVGNQQIRHYQFEEDRLTLRTPPLQMNNSSLVGVLIWQKVKK
Sequences:
>Translated_145_residues MINNRFIGSWSLISQHFILPDNSIHYPMGQNMLGRINYEKQGTMAAQLYRGDRAKFTTEDWLQGSDSEIKNAFLTALTYF GRYHIDEEQGIVTHTVEGCLFPNWVGNQQIRHYQFEEDRLTLRTPPLQMNNSSLVGVLIWQKVKK >Mature_145_residues MINNRFIGSWSLISQHFILPDNSIHYPMGQNMLGRINYEKQGTMAAQLYRGDRAKFTTEDWLQGSDSEIKNAFLTALTYF GRYHIDEEQGIVTHTVEGCLFPNWVGNQQIRHYQFEEDRLTLRTPPLQMNNSSLVGVLIWQKVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16895; Mature: 16895
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNRFIGSWSLISQHFILPDNSIHYPMGQNMLGRINYEKQGTMAAQLYRGDRAKFTTED CCCCEECCCHHHHHCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHH WLQGSDSEIKNAFLTALTYFGRYHIDEEQGIVTHTVEGCLFPNWVGNQQIRHYQFEEDRL HHCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCE TLRTPPLQMNNSSLVGVLIWQKVKK EEECCCCEECCCCEEEEEEEHHHCC >Mature Secondary Structure MINNRFIGSWSLISQHFILPDNSIHYPMGQNMLGRINYEKQGTMAAQLYRGDRAKFTTED CCCCEECCCHHHHHCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCHHH WLQGSDSEIKNAFLTALTYFGRYHIDEEQGIVTHTVEGCLFPNWVGNQQIRHYQFEEDRL HHCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCE TLRTPPLQMNNSSLVGVLIWQKVKK EEECCCCEECCCCEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA