Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218927735
Identifier: 218927735
GI number: 218927735
Start: 583588
End: 583698
Strand: Direct
Name: 218927735
Synonym: YPO0538
Alternate gene names: NA
Gene position: 583588-583698 (Clockwise)
Preceding gene: 218927734
Following gene: 218927736
Centisome position: 12.54
GC content: 46.85
Gene sequence:
>111_bases GTGTTAAGTCTCACACTGGTCGCTGCTGTCTTTCTGACCGTTCTGCTGTGTTTGGCCCTGACCTACCTATTTATGGGTAA TTCCCATCATTCTACTGAATCCAACGAGTGA
Upstream 100 bases:
>100_bases GATGAAGTTGCGGCGGAAAATCATTCTTCAACGCTATCAGAATGAAATTGACTTGATGTATAGCGATTAATTTGTTCACC ATTCCTCCCCGCAGTGACCG
Downstream 100 bases:
>100_bases AAATTATCAGCCTGATTTAGTTCCATAACCATTCACTACCTCGATGTTATAAACCAGTTTTAACTTGTTTTCTGGGGGAT TATTCCTTTAATTGACGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 36
Protein sequence:
>36_residues MLSLTLVAAVFLTVLLCLALTYLFMGNSHHSTESNE
Sequences:
>Translated_36_residues MLSLTLVAAVFLTVLLCLALTYLFMGNSHHSTESNE >Mature_36_residues MLSLTLVAAVFLTVLLCLALTYLFMGNSHHSTESNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3941; Mature: 3941
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLTLVAAVFLTVLLCLALTYLFMGNSHHSTESNE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLSLTLVAAVFLTVLLCLALTYLFMGNSHHSTESNE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA