Click here to switch to the map view.

The map label for this gene is 15921458

Identifier: 15921458

GI number: 15921458

Start: 1197399

End: 1198130

Strand: Direct

Name: 15921458

Synonym: ST1195

Alternate gene names: NA

Gene position: 1197399-1198130 (Clockwise)

Preceding gene: 15921457

Following gene: 15921459

Centisome position: 44.43

GC content: 32.38

Gene sequence:

>732_bases
ATGGAGCCTGCTATTTCTGAAGAAGAATTTTACAAAATCTTAAAGAAGAAGTATGAAAGAGGGGTTAAGGGGTTTTTAAT
TAGTGGTGGTTTTGATCCACAAGGGAGGTTACTGAATCTCAAAAGAATATTACCGGTTATGAAAAGGGTTAAAAGAGAGT
TCGAAGATGTGATTTTTAATATTCATCCTGGGTTAGTAGAAAGGGAATTAATAGAGGAAATGTCTGATGTTGTCGATATT
GTGGATTACGAGTTTGCTTACTCACTAAGAGCTTTTGAAAATAAGGGGATAAAGAGGAATAGGGAGGATTATATTAAAGT
TTTGGAAGATTTTATAACTAGGGGTCCTAAATATATTGTTCCCCATATAATTTTAGGTTTTCCTAATGATGATATTGAGG
AGAGTATTAAAATTGCTTCTTCTATGAAACCTTATCTTGTTAATTTCTTAGTCCTCATACCTACTAAAGGTACTCCCTCG
GAGAATTTTGGTATCCCTCAGATTTCTGATATTATTAAATATGTTGAGCTTGGTAGTAGGTTAATGAATGGAAAGGTTAG
TATTGGTTGTATGAGACCTTATAAGATTAAGGATGAGTTAGATAAGATAGTAGTAGAAAGAGGTCTTGTTGAGAGAATTT
CTAATCCTTCCAGGAAATTATGGGGTTATTTAGATATGTATGATGCTTGCTGTAGTTTACCTTTAGAGTATTTAAATAAA
TTTAAACTTTAA

Upstream 100 bases:

>100_bases
ATATGGGTTCGTAATTTTGAGAAAATTTTCTGTTATAAGCATATCTGGTGGTTCTTGTTCTTTAAGTTGCACATATTGTA
ATTCAACATATATAAAGAGT

Downstream 100 bases:

>100_bases
TTTTTTAAACTCCGAACACATGTTCGATTATATATGATCTATATAATTGGTTCAGGTATTGCTGGTTTATCTGCTGGTGT
TGCGTTAAGAAGGGCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Biotin Synthase-Related Protein; Elongator /MiaB/NifB; Radical SAM Family Protein; Biotin Synthase; Radical SAM Superfamily Protein; Biotin Synthase-Related Protein Radical SAM Superfamily

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MEPAISEEEFYKILKKKYERGVKGFLISGGFDPQGRLLNLKRILPVMKRVKREFEDVIFNIHPGLVERELIEEMSDVVDI
VDYEFAYSLRAFENKGIKRNREDYIKVLEDFITRGPKYIVPHIILGFPNDDIEESIKIASSMKPYLVNFLVLIPTKGTPS
ENFGIPQISDIIKYVELGSRLMNGKVSIGCMRPYKIKDELDKIVVERGLVERISNPSRKLWGYLDMYDACCSLPLEYLNK
FKL

Sequences:

>Translated_243_residues
MEPAISEEEFYKILKKKYERGVKGFLISGGFDPQGRLLNLKRILPVMKRVKREFEDVIFNIHPGLVERELIEEMSDVVDI
VDYEFAYSLRAFENKGIKRNREDYIKVLEDFITRGPKYIVPHIILGFPNDDIEESIKIASSMKPYLVNFLVLIPTKGTPS
ENFGIPQISDIIKYVELGSRLMNGKVSIGCMRPYKIKDELDKIVVERGLVERISNPSRKLWGYLDMYDACCSLPLEYLNK
FKL
>Mature_243_residues
MEPAISEEEFYKILKKKYERGVKGFLISGGFDPQGRLLNLKRILPVMKRVKREFEDVIFNIHPGLVERELIEEMSDVVDI
VDYEFAYSLRAFENKGIKRNREDYIKVLEDFITRGPKYIVPHIILGFPNDDIEESIKIASSMKPYLVNFLVLIPTKGTPS
ENFGIPQISDIIKYVELGSRLMNGKVSIGCMRPYKIKDELDKIVVERGLVERISNPSRKLWGYLDMYDACCSLPLEYLNK
FKL

Specific function: Unknown

COG id: COG1856

COG function: function code S; Uncharacterized homolog of biotin synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28193; Mature: 28193

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS50007 PIPLC_X_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAISEEEFYKILKKKYERGVKGFLISGGFDPQGRLLNLKRILPVMKRVKREFEDVIFN
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPGLVERELIEEMSDVVDIVDYEFAYSLRAFENKGIKRNREDYIKVLEDFITRGPKYIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE
PHIILGFPNDDIEESIKIASSMKPYLVNFLVLIPTKGTPSENFGIPQISDIIKYVELGSR
CEEEEECCCCCHHHHHHHHHCCCHHHHHEEHEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LMNGKVSIGCMRPYKIKDELDKIVVERGLVERISNPSRKLWGYLDMYDACCSLPLEYLNK
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHH
FKL
CCC
>Mature Secondary Structure
MEPAISEEEFYKILKKKYERGVKGFLISGGFDPQGRLLNLKRILPVMKRVKREFEDVIFN
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPGLVERELIEEMSDVVDIVDYEFAYSLRAFENKGIKRNREDYIKVLEDFITRGPKYIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE
PHIILGFPNDDIEESIKIASSMKPYLVNFLVLIPTKGTPSENFGIPQISDIIKYVELGSR
CEEEEECCCCCHHHHHHHHHCCCHHHHHEEHEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LMNGKVSIGCMRPYKIKDELDKIVVERGLVERISNPSRKLWGYLDMYDACCSLPLEYLNK
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHH
FKL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA