Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185441
Identifier: 159185441
GI number: 159185441
Start: 2242707
End: 2242964
Strand: Direct
Name: 159185441
Synonym: Atu8176
Alternate gene names: NA
Gene position: 2242707-2242964 (Clockwise)
Preceding gene: 15889541
Following gene: 159185133
Centisome position: 78.92
GC content: 50.39
Gene sequence:
>258_bases ATGACCCGCATCTTTACCGCCATTGCCACCGCCTCCCTCTTTTCCGTTCTGTCCTTTGCAGGCATCGCCCATGCCGACAG CATGAAAACCGATACGATGAAGAAGGATACCATGCATAGTGACATGATGAAGGCGGAGACGATGAAGAAAGACGGCATGT CCATGACCAGCAAAAAAGACTGCATGCACAAGGCCGGCATGCAAAAGGACAAGATGAAAAAGGCCGACATGATGAAGGCC TGCGACACGATGAAATAA
Upstream 100 bases:
>100_bases GCGTGAAGATGTAACGACCGGCTGGTCGCATCCGAATGGACAATCGTGAACCCCCGGCGCAATGCCGGCGGACACGCAAC GACATCCAGAGGAGACCTTC
Downstream 100 bases:
>100_bases GCGCGCAGCCCGGCTGACCAGCGGCGAAACACACCCGCCGGCCTGAACGCAAAAAGCCCGCGCCGGTTCTCACCGATGCG GGCTTTCTCAACTGAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTRIFTAIATASLFSVLSFAGIAHADSMKTDTMKKDTMHSDMMKAETMKKDGMSMTSKKDCMHKAGMQKDKMKKADMMKA CDTMK
Sequences:
>Translated_85_residues MTRIFTAIATASLFSVLSFAGIAHADSMKTDTMKKDTMHSDMMKAETMKKDGMSMTSKKDCMHKAGMQKDKMKKADMMKA CDTMK >Mature_84_residues TRIFTAIATASLFSVLSFAGIAHADSMKTDTMKKDTMHSDMMKAETMKKDGMSMTSKKDCMHKAGMQKDKMKKADMMKAC DTMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9483; Mature: 9352
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 17.6 %Met (Translated Protein) 20.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 16.7 %Met (Mature Protein) 19.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIFTAIATASLFSVLSFAGIAHADSMKTDTMKKDTMHSDMMKAETMKKDGMSMTSKKD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH CMHKAGMQKDKMKKADMMKACDTMK HHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRIFTAIATASLFSVLSFAGIAHADSMKTDTMKKDTMHSDMMKAETMKKDGMSMTSKKD CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH CMHKAGMQKDKMKKADMMKACDTMK HHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA