Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is ureJ [H]

Identifier: 159185133

GI number: 159185133

Start: 2243887

End: 2244477

Strand: Direct

Name: ureJ [H]

Synonym: Atu2271

Alternate gene names: 159185133

Gene position: 2243887-2244477 (Clockwise)

Preceding gene: 159185441

Following gene: 159185134

Centisome position: 78.97

GC content: 65.65

Gene sequence:

>591_bases
ATGTTGAAAAGACTAAGCCTCGCCGCCGCCGCACTCGGCCTCACCACCCTGCCCGCGTTTGCCCATCTGAACCCGGAAGA
ACACGGCTCCTTCATGGCTGGTGTTTCCCACCCCTTCTTCGGTGCGGACCATATTCTGGCGATGGTGGCCGTCGGTATCT
GGGCCTCGCAGATCGCCTCTGCCCGCAACGACCGCAAGGCGCTGTGGATCGTGCCCGCCGCCTTCGTCGGCACCATGGCC
GTCGGCTTCCTGATGGCGGTTTACGGCGTCGAACTTCCCTTCGTCGAACCCGCCATTCTCGCCTCGGTCATCGGCCTTGG
CCTGCTGGTGGCCATGGCGGCAAGGCTCCCCACGGCAGCAGCGGCGGCCGTCGTTGGTGCTTTCGCCCTTTTTCACGGCC
ATGCCCATGGCGGTGAACTCGGTAGCGCGGGTGCCCTGCAATTCGGTATCGGCTTCATGATTGCCACCGCCATCCTGCAT
CTTGCCGGCATCGCGCTCGGTCTCGGCATCGCCCGTTTCGGCTCGGCCGCAAGCCGCACCGTCGGCGCGCTGACGGCGAT
TGCGGGCCTCTCGCTTGCCTTTGGCGGTTGA

Upstream 100 bases:

>100_bases
TCTTGGCCTTCGAGATATCGTCCCGTGTCTCATTGCCGCGCCGCCCGTGGCGGGAAGCCCAAGATCCCGCTGTGAACGGC
AACAATTTCAAGAGGGAATC

Downstream 100 bases:

>100_bases
GGATCATTACCGAAATTTAAAATTTGGACCGCTTTGAAAAGCCTGAATTGTGGCCTACCTCCTTATCGTGGATTTACGCT
TCACGGTAAGGAGGCAGCAT

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA
VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH
LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG

Sequences:

>Translated_196_residues
MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA
VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH
LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG
>Mature_196_residues
MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA
VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH
LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19593; Mature: 19593

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIAS
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAA
HCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
AAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRT
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGALTAIAGLSLAFGG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIAS
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAA
HCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
AAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRT
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGALTAIAGLSLAFGG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]