Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ureJ [H]
Identifier: 159185133
GI number: 159185133
Start: 2243887
End: 2244477
Strand: Direct
Name: ureJ [H]
Synonym: Atu2271
Alternate gene names: 159185133
Gene position: 2243887-2244477 (Clockwise)
Preceding gene: 159185441
Following gene: 159185134
Centisome position: 78.97
GC content: 65.65
Gene sequence:
>591_bases ATGTTGAAAAGACTAAGCCTCGCCGCCGCCGCACTCGGCCTCACCACCCTGCCCGCGTTTGCCCATCTGAACCCGGAAGA ACACGGCTCCTTCATGGCTGGTGTTTCCCACCCCTTCTTCGGTGCGGACCATATTCTGGCGATGGTGGCCGTCGGTATCT GGGCCTCGCAGATCGCCTCTGCCCGCAACGACCGCAAGGCGCTGTGGATCGTGCCCGCCGCCTTCGTCGGCACCATGGCC GTCGGCTTCCTGATGGCGGTTTACGGCGTCGAACTTCCCTTCGTCGAACCCGCCATTCTCGCCTCGGTCATCGGCCTTGG CCTGCTGGTGGCCATGGCGGCAAGGCTCCCCACGGCAGCAGCGGCGGCCGTCGTTGGTGCTTTCGCCCTTTTTCACGGCC ATGCCCATGGCGGTGAACTCGGTAGCGCGGGTGCCCTGCAATTCGGTATCGGCTTCATGATTGCCACCGCCATCCTGCAT CTTGCCGGCATCGCGCTCGGTCTCGGCATCGCCCGTTTCGGCTCGGCCGCAAGCCGCACCGTCGGCGCGCTGACGGCGAT TGCGGGCCTCTCGCTTGCCTTTGGCGGTTGA
Upstream 100 bases:
>100_bases TCTTGGCCTTCGAGATATCGTCCCGTGTCTCATTGCCGCGCCGCCCGTGGCGGGAAGCCCAAGATCCCGCTGTGAACGGC AACAATTTCAAGAGGGAATC
Downstream 100 bases:
>100_bases GGATCATTACCGAAATTTAAAATTTGGACCGCTTTGAAAAGCCTGAATTGTGGCCTACCTCCTTATCGTGGATTTACGCT TCACGGTAAGGAGGCAGCAT
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG
Sequences:
>Translated_196_residues MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG >Mature_196_residues MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMA VGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILH LAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG
Specific function: Needed for full hydrogenase activity [H]
COG id: COG2370
COG function: function code O; Hydrogenase/urease accessory protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007038 [H]
Pfam domain/function: PF04955 HupE_UreJ [H]
EC number: NA
Molecular weight: Translated: 19593; Mature: 19593
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIAS CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAA HCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH AAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRT HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGALTAIAGLSLAFGG HHHHHHHHHHHHHCCC >Mature Secondary Structure MLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIAS CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAA HCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH AAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRT HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGALTAIAGLSLAFGG HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1597428 [H]