Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pazS [H]
Identifier: 159185141
GI number: 159185141
Start: 2255101
End: 2255553
Strand: Direct
Name: pazS [H]
Synonym: Atu2283
Alternate gene names: 159185141
Gene position: 2255101-2255553 (Clockwise)
Preceding gene: 159185140
Following gene: 15889560
Centisome position: 79.36
GC content: 58.94
Gene sequence:
>453_bases ATGCTGAACAGAACTGCCAAATTCGCCGGCCTCGCCATCGTCGCCGCTCTTTGCGCTTTTCCCGCCTTGTCCGCCGAAAT CGAAGTGAAGATGCTCAACAAGGGCAGCGACGGTCAGGCGATGGTCTTTGAACCTGCAACCGTCAAGGCCGCCGTCGGCG ACGTCATCACTTTCGTGCCGGTCGACAAGGGCCATGATGCGGCAGCCGTGAAGGACATGATCCCCGAGGGTGTTGCAGAG TTCAAGGGCAAGATGAACGAAGCGGTGAAGATCACGGTCGAGAAGGAAGGTGCTTATGTCGTCAAATGCACCCCGCATCT CGGCATGGGCATGATCGCGCTCGTCGTTGTCGGCGATGCGACACCCGCCAATCTGGACGTCGTCAAGAACGGCAAACTGC CGAAAAAGGCACGCGACCGGCTGAACGAGGAGATCGCCAAGCTCGGCCTCTAA
Upstream 100 bases:
>100_bases GTTGCCGCATTTGATTTTTCGCAAAGATGGCCTGTCCGCTCCTGCGCTAAGACGACGGGGACACATTCGCGTGGATGTGC TTTCTCTCAGGAGCAGAATT
Downstream 100 bases:
>100_bases CCTCATATCGCCTCGGTCCCGCACCGGCCTCGTTGATCCGGCATCATCGAAATGCCGCAACGGCCGGCGCGGACCGCAGG TTGAGAAAAGTTTCGCAATC
Product: pseudoazurin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLNRTAKFAGLAIVAALCAFPALSAEIEVKMLNKGSDGQAMVFEPATVKAAVGDVITFVPVDKGHDAAAVKDMIPEGVAE FKGKMNEAVKITVEKEGAYVVKCTPHLGMGMIALVVVGDATPANLDVVKNGKLPKKARDRLNEEIAKLGL
Sequences:
>Translated_150_residues MLNRTAKFAGLAIVAALCAFPALSAEIEVKMLNKGSDGQAMVFEPATVKAAVGDVITFVPVDKGHDAAAVKDMIPEGVAE FKGKMNEAVKITVEKEGAYVVKCTPHLGMGMIALVVVGDATPANLDVVKNGKLPKKARDRLNEEIAKLGL >Mature_150_residues MLNRTAKFAGLAIVAALCAFPALSAEIEVKMLNKGSDGQAMVFEPATVKAAVGDVITFVPVDKGHDAAAVKDMIPEGVAE FKGKMNEAVKITVEKEGAYVVKCTPHLGMGMIALVVVGDATPANLDVVKNGKLPKKARDRLNEEIAKLGL
Specific function: This soluble electron transfer copper protein is required for the inactivation of copper-containing nitrite reductase in the presence of oxygen [H]
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002386 - InterPro: IPR000923 - InterPro: IPR001235 - InterPro: IPR008972 - InterPro: IPR012745 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 15731; Mature: 15731
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRTAKFAGLAIVAALCAFPALSAEIEVKMLNKGSDGQAMVFEPATVKAAVGDVITFVP CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHCCEEEEEE VDKGHDAAAVKDMIPEGVAEFKGKMNEAVKITVEKEGAYVVKCTPHLGMGMIALVVVGDA CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCC TPANLDVVKNGKLPKKARDRLNEEIAKLGL CCCCEEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNRTAKFAGLAIVAALCAFPALSAEIEVKMLNKGSDGQAMVFEPATVKAAVGDVITFVP CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHCCEEEEEE VDKGHDAAAVKDMIPEGVAEFKGKMNEAVKITVEKEGAYVVKCTPHLGMGMIALVVVGDA CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCC TPANLDVVKNGKLPKKARDRLNEEIAKLGL CCCCEEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9032456; 7772045 [H]