Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889560
Identifier: 15889560
GI number: 15889560
Start: 2255792
End: 2256949
Strand: Direct
Name: 15889560
Synonym: Atu2284
Alternate gene names: NA
Gene position: 2255792-2256949 (Clockwise)
Preceding gene: 159185141
Following gene: 159185142
Centisome position: 79.39
GC content: 60.02
Gene sequence:
>1158_bases ATGATAGACCGGATCACCGCTTTGATTCAGGCAGGTTTCAGCGCTATCGGCAAGGCTGCCGGTCTTCTCGTCGCATGGCT TTTATGGCCCTTCATGGCCGCGCATGGCTGGTACAGCGGCCGCAACTGGCTCATCAAGGGCCCAATTGCTCTGATCGCCA TCCTGCTGGCCGGTTTCTACGGATATTTCGTCTGGCAAACCCAGGTCTGGACGAATTTCGATCCGGATTACATTTCCCGC TACAAACTTGCCGAACGCACCGTGCCCCCCGGACAGGAATTGCCGGCCGTAACTCCGGCTGCTGCCGCCGGCGCAACCGG TGTTGCAGCAAACACCTCCGCACCCGTGTGCCAGCGCTCGGCCATCGTGGATGCTGCCGTCGACCTTACCGACTTCAACG TCAACCAGAATGCATGGATTTCCTCCATGCTGCTCTATCGCCTCGGCCTCTTTGGTATGGACTGGGACAGCACACCGTTT CTCGATAACAAGGCCTCGTTCCAGCGCGGCGTGAACCAGGCTGTGCGCCGCACCTCGGTGGAGCTGGTAGATACGCTCGG CCGCGTGCGCGGCACCTCGGGTATCAATAACAATCTCCAGGAAGCGCGTGGCAACATGCAGTTCAGCGAATATTCCTGGT ATTTCGGCCTCGATCCCTTCGGCCCGAAGACGCCGACCCCCAGCTATTACCGCGCCGCAATCCGCAGCTTCCAGGCCTTC AACGGCGAACTCACCGCCTGCAAAGCCGTCTTCGATACCCGCGCCGACAACCTGATCCAGTTCATCGACCGTATCGCAGG CGATATCGGTTCCACGTCTGCAATTCTGCGCGAACGTTCGGAAAACTATAATGGCGGCTGGTTCGACACGCGTGCCGATG ACCGCTTCTGGTTCGCCTATGGCCAGCTTTATGGTTATTACGGCGTGCTTTCCGCCGCCGGATCCGACTTTGCGCAGGTC ATCCGCGAACGCAACCTGACCAACCTCTGGAACGACACGCTGTCGCAGACCCGCGCGGCGCTGCGCATCCAGCCGGCCAT CATTTCCAACGGCGAGGAAAGCGGCTGGCTCATGCCGTCGCACCTCGCCACCATGGGATTTTATGTTCTGCGGGTGCGCT CGAACCTCGTCGAGCTTCGCTCGGTTCTCGACCGTTGA
Upstream 100 bases:
>100_bases AGTAAATGGCCGCGGTTGACAGGGAACGCCAAAGGCACCCTGCCGAACCGCGGATTTTTCTTGCCGCATCCGGCCCACGG GCAGAGGAGACGATGACGAC
Downstream 100 bases:
>100_bases TAAGGAGGCCGGCCCGCTGTCCGGCCGGCTTACTCTATCAGCCGCAGACGGATGGTCTTCGCCACCAGCTGTGTGCGGTT GACGCAATCGAGCTTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIDRITALIQAGFSAIGKAAGLLVAWLLWPFMAAHGWYSGRNWLIKGPIALIAILLAGFYGYFVWQTQVWTNFDPDYISR YKLAERTVPPGQELPAVTPAAAAGATGVAANTSAPVCQRSAIVDAAVDLTDFNVNQNAWISSMLLYRLGLFGMDWDSTPF LDNKASFQRGVNQAVRRTSVELVDTLGRVRGTSGINNNLQEARGNMQFSEYSWYFGLDPFGPKTPTPSYYRAAIRSFQAF NGELTACKAVFDTRADNLIQFIDRIAGDIGSTSAILRERSENYNGGWFDTRADDRFWFAYGQLYGYYGVLSAAGSDFAQV IRERNLTNLWNDTLSQTRAALRIQPAIISNGEESGWLMPSHLATMGFYVLRVRSNLVELRSVLDR
Sequences:
>Translated_385_residues MIDRITALIQAGFSAIGKAAGLLVAWLLWPFMAAHGWYSGRNWLIKGPIALIAILLAGFYGYFVWQTQVWTNFDPDYISR YKLAERTVPPGQELPAVTPAAAAGATGVAANTSAPVCQRSAIVDAAVDLTDFNVNQNAWISSMLLYRLGLFGMDWDSTPF LDNKASFQRGVNQAVRRTSVELVDTLGRVRGTSGINNNLQEARGNMQFSEYSWYFGLDPFGPKTPTPSYYRAAIRSFQAF NGELTACKAVFDTRADNLIQFIDRIAGDIGSTSAILRERSENYNGGWFDTRADDRFWFAYGQLYGYYGVLSAAGSDFAQV IRERNLTNLWNDTLSQTRAALRIQPAIISNGEESGWLMPSHLATMGFYVLRVRSNLVELRSVLDR >Mature_385_residues MIDRITALIQAGFSAIGKAAGLLVAWLLWPFMAAHGWYSGRNWLIKGPIALIAILLAGFYGYFVWQTQVWTNFDPDYISR YKLAERTVPPGQELPAVTPAAAAGATGVAANTSAPVCQRSAIVDAAVDLTDFNVNQNAWISSMLLYRLGLFGMDWDSTPF LDNKASFQRGVNQAVRRTSVELVDTLGRVRGTSGINNNLQEARGNMQFSEYSWYFGLDPFGPKTPTPSYYRAAIRSFQAF NGELTACKAVFDTRADNLIQFIDRIAGDIGSTSAILRERSENYNGGWFDTRADDRFWFAYGQLYGYYGVLSAAGSDFAQV IRERNLTNLWNDTLSQTRAALRIQPAIISNGEESGWLMPSHLATMGFYVLRVRSNLVELRSVLDR
Specific function: Unknown
COG id: COG5345
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42808; Mature: 42808
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRITALIQAGFSAIGKAAGLLVAWLLWPFMAAHGWYSGRNWLIKGPIALIAILLAGFY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHH GYFVWQTQVWTNFDPDYISRYKLAERTVPPGQELPAVTPAAAAGATGVAANTSAPVCQRS HHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHH AIVDAAVDLTDFNVNQNAWISSMLLYRLGLFGMDWDSTPFLDNKASFQRGVNQAVRRTSV HHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELVDTLGRVRGTSGINNNLQEARGNMQFSEYSWYFGLDPFGPKTPTPSYYRAAIRSFQAF HHHHHHHHHCCCCCCCCCHHHHHCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHC NGELTACKAVFDTRADNLIQFIDRIAGDIGSTSAILRERSENYNGGWFDTRADDRFWFAY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHH GQLYGYYGVLSAAGSDFAQVIRERNLTNLWNDTLSQTRAALRIQPAIISNGEESGWLMPS HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCCHH HLATMGFYVLRVRSNLVELRSVLDR HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDRITALIQAGFSAIGKAAGLLVAWLLWPFMAAHGWYSGRNWLIKGPIALIAILLAGFY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHH GYFVWQTQVWTNFDPDYISRYKLAERTVPPGQELPAVTPAAAAGATGVAANTSAPVCQRS HHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHH AIVDAAVDLTDFNVNQNAWISSMLLYRLGLFGMDWDSTPFLDNKASFQRGVNQAVRRTSV HHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELVDTLGRVRGTSGINNNLQEARGNMQFSEYSWYFGLDPFGPKTPTPSYYRAAIRSFQAF HHHHHHHHHCCCCCCCCCHHHHHCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHC NGELTACKAVFDTRADNLIQFIDRIAGDIGSTSAILRERSENYNGGWFDTRADDRFWFAY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHH GQLYGYYGVLSAAGSDFAQVIRERNLTNLWNDTLSQTRAALRIQPAIISNGEESGWLMPS HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCCHH HLATMGFYVLRVRSNLVELRSVLDR HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA