Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184916
Identifier: 159184916
GI number: 159184916
Start: 1769199
End: 1769444
Strand: Reverse
Name: 159184916
Synonym: Atu1783
Alternate gene names: NA
Gene position: 1769444-1769199 (Counterclockwise)
Preceding gene: 15889088
Following gene: 15889086
Centisome position: 62.27
GC content: 55.28
Gene sequence:
>246_bases ATGACTGCATTTACGGTGCGCTTGCCTGATGAGGTCGCCGAAAAGCTGGATCAGTTGGCGGAAAAGCTTGATCGCTCGCG GTCTTATATGGCGGTGCAAGCGATTGAGGACTTTGTTGCCCGCGAGGAGTGGCAGCTTGCCGAAATCGAGGCCGGTTTGG CTGAAGCGGATCGCGGCGAGTTCGGAACGCCGGAAGATCTCGCAAACATTGTCGGAAGATATGTAAAAACCGCCCGGCCA TTATGA
Upstream 100 bases:
>100_bases AGATTCTTTCTTACATTCCCACGTCAGGATGAAATGCCACAAGCTTGACGAACCAATATGGTTCACAAATAATCATAGTG AACCAGGAAAGGTTGCGATC
Downstream 100 bases:
>100_bases GTGACCGGAGAATTCGGTGGACCTTGCGGGCGCTACGCCGGCTCGATGAAATTGGTGCGCATATCGAACAGGATAACCCG GCTGCTGCGGCCAGAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTAFTVRLPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREEWQLAEIEAGLAEADRGEFGTPEDLANIVGRYVKTARP L
Sequences:
>Translated_81_residues MTAFTVRLPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREEWQLAEIEAGLAEADRGEFGTPEDLANIVGRYVKTARP L >Mature_80_residues TAFTVRLPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREEWQLAEIEAGLAEADRGEFGTPEDLANIVGRYVKTARPL
Specific function: Unknown
COG id: COG3905
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002145 [H]
Pfam domain/function: PF01402 RHH_1 [H]
EC number: NA
Molecular weight: Translated: 9112; Mature: 8981
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFTVRLPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREEWQLAEIEAGLAEADRGE CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC FGTPEDLANIVGRYVKTARPL CCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAFTVRLPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREEWQLAEIEAGLAEADRGE CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC FGTPEDLANIVGRYVKTARPL CCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]