Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889088

Identifier: 15889088

GI number: 15889088

Start: 1769564

End: 1770232

Strand: Reverse

Name: 15889088

Synonym: Atu1784

Alternate gene names: NA

Gene position: 1770232-1769564 (Counterclockwise)

Preceding gene: 15889089

Following gene: 159184916

Centisome position: 62.3

GC content: 56.35

Gene sequence:

>669_bases
ATGACCGATATTCCAGTCAAAATTTCATTCGCAGCCCGTCTGCGCAACAGCTTCCTGACGGGTGTTCTGATCCTCGCACC
TGTCACCATCACCATGTGGCTGGTGTGGAGTTTCCTGCAATGGGCGGATAGCTGGGTCAAACCCTATATTCCCGCCCGTT
ACGATCCCGAGCAATATTTCGATGTGGCGATCCCCGGTTTCGGGCTCTTGATTGCCGTTATCGGTATCACGCTCATCGGC
TTTCTCGGCAATAACCTGATCGGCAAATGGATCGTTGGCGTCGGCGAATCCGTTCTCAACCGCATGCCGCTGGTGCGGCC
GATCTATAAAAGCATCAAGCAGCTGTTTGAATCCGTGCTGAAGGAGCATTCGAACTCCTTCAAGAAAGTCGGCCTGATCG
AATTTCCCTCTTCCGGCACTTGGGCGATGGTTTTCGTATCCTCAGAAGTCAAGGGCGAGCTTGCGCACCGTTTCAATGAG
ATGGGCCAGCAGATGGTCGCGGTCTTCCTGCCGCCGACCCCGGTGCCGACGGCCGGTTTCCTGCTGTTCGTGCCGAAAGA
CAAGATCGTGATGCTGGACATGACGCCGGAGGACGCGGCGAAACTGTTGATATCAGGTGGTCTGGTGGCCCCGGACTTCA
CGCCGCCGAAGGTGATCGCGCCGGTTTGA

Upstream 100 bases:

>100_bases
GAATATTTCACAGTTCTTCGCTTGCATGGCGGAACTCCATCCGGCATTGTCGGTTTTCATCCGGGTTTCGATGGCGACAA
CGCTTAATTCCGAACGGTAA

Downstream 100 bases:

>100_bases
AAGGCCTTAGCAAGGCACTAGATTCTTTCTTACATTCCCACGTCAGGATGAAATGCCACAAGCTTGACGAACCAATATGG
TTCACAAATAATCATAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTDIPVKISFAARLRNSFLTGVLILAPVTITMWLVWSFLQWADSWVKPYIPARYDPEQYFDVAIPGFGLLIAVIGITLIG
FLGNNLIGKWIVGVGESVLNRMPLVRPIYKSIKQLFESVLKEHSNSFKKVGLIEFPSSGTWAMVFVSSEVKGELAHRFNE
MGQQMVAVFLPPTPVPTAGFLLFVPKDKIVMLDMTPEDAAKLLISGGLVAPDFTPPKVIAPV

Sequences:

>Translated_222_residues
MTDIPVKISFAARLRNSFLTGVLILAPVTITMWLVWSFLQWADSWVKPYIPARYDPEQYFDVAIPGFGLLIAVIGITLIG
FLGNNLIGKWIVGVGESVLNRMPLVRPIYKSIKQLFESVLKEHSNSFKKVGLIEFPSSGTWAMVFVSSEVKGELAHRFNE
MGQQMVAVFLPPTPVPTAGFLLFVPKDKIVMLDMTPEDAAKLLISGGLVAPDFTPPKVIAPV
>Mature_221_residues
TDIPVKISFAARLRNSFLTGVLILAPVTITMWLVWSFLQWADSWVKPYIPARYDPEQYFDVAIPGFGLLIAVIGITLIGF
LGNNLIGKWIVGVGESVLNRMPLVRPIYKSIKQLFESVLKEHSNSFKKVGLIEFPSSGTWAMVFVSSEVKGELAHRFNEM
GQQMVAVFLPPTPVPTAGFLLFVPKDKIVMLDMTPEDAAKLLISGGLVAPDFTPPKVIAPV

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24517; Mature: 24386

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIPVKISFAARLRNSFLTGVLILAPVTITMWLVWSFLQWADSWVKPYIPARYDPEQYF
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DVAIPGFGLLIAVIGITLIGFLGNNLIGKWIVGVGESVLNRMPLVRPIYKSIKQLFESVL
EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KEHSNSFKKVGLIEFPSSGTWAMVFVSSEVKGELAHRFNEMGQQMVAVFLPPTPVPTAGF
HHHCCCHHHCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCE
LLFVPKDKIVMLDMTPEDAAKLLISGGLVAPDFTPPKVIAPV
EEEECCCCEEEEECCHHHHHHHHHCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TDIPVKISFAARLRNSFLTGVLILAPVTITMWLVWSFLQWADSWVKPYIPARYDPEQYF
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DVAIPGFGLLIAVIGITLIGFLGNNLIGKWIVGVGESVLNRMPLVRPIYKSIKQLFESVL
EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KEHSNSFKKVGLIEFPSSGTWAMVFVSSEVKGELAHRFNEMGQQMVAVFLPPTPVPTAGF
HHHCCCHHHCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCE
LLFVPKDKIVMLDMTPEDAAKLLISGGLVAPDFTPPKVIAPV
EEEECCCCEEEEECCHHHHHHHHHCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA