Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889086
Identifier: 15889086
GI number: 15889086
Start: 1768912
End: 1769202
Strand: Reverse
Name: 15889086
Synonym: Atu1782
Alternate gene names: NA
Gene position: 1769202-1768912 (Counterclockwise)
Preceding gene: 159184916
Following gene: 159184914
Centisome position: 62.26
GC content: 58.08
Gene sequence:
>291_bases ATGAGTGACCGGAGAATTCGGTGGACCTTGCGGGCGCTACGCCGGCTCGATGAAATTGGTGCGCATATCGAACAGGATAA CCCGGCTGCTGCGGCCAGAGTGATTTCCCGCATTGTTTCGGCAGCCGATATGTTGGTGGAGCAGCCAGCCATCGGACGAG TCGGGCGTATCAAGGGAACACGGGAAGCCGTGCTTTCCGACATTTCCTATATCATCGCCTATCGCGTCGGCCGGGATATC GAAATCCTGACGATCATCCATACCTCGCGGCGTTGGCCTTCGGCGCTCTGA
Upstream 100 bases:
>100_bases AAATCGAGGCCGGTTTGGCTGAAGCGGATCGCGGCGAGTTCGGAACGCCGGAAGATCTCGCAAACATTGTCGGAAGATAT GTAAAAACCGCCCGGCCATT
Downstream 100 bases:
>100_bases CCAAACAACACTCTCAGTGTGCCCAAATCAATCCTCGTCATCCAGATCGTCCACCTCTGTCCCCGTTGTGGTCGCGTGGA AAACCGGAACGAAAAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSDRRIRWTLRALRRLDEIGAHIEQDNPAAAARVISRIVSAADMLVEQPAIGRVGRIKGTREAVLSDISYIIAYRVGRDI EILTIIHTSRRWPSAL
Sequences:
>Translated_96_residues MSDRRIRWTLRALRRLDEIGAHIEQDNPAAAARVISRIVSAADMLVEQPAIGRVGRIKGTREAVLSDISYIIAYRVGRDI EILTIIHTSRRWPSAL >Mature_95_residues SDRRIRWTLRALRRLDEIGAHIEQDNPAAAARVISRIVSAADMLVEQPAIGRVGRIKGTREAVLSDISYIIAYRVGRDIE ILTIIHTSRRWPSAL
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007712 - InterPro: IPR012753 [H]
Pfam domain/function: PF05016 Plasmid_stabil [H]
EC number: NA
Molecular weight: Translated: 10846; Mature: 10715
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRRIRWTLRALRRLDEIGAHIEQDNPAAAARVISRIVSAADMLVEQPAIGRVGRIKGT CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH REAVLSDISYIIAYRVGRDIEILTIIHTSRRWPSAL HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure SDRRIRWTLRALRRLDEIGAHIEQDNPAAAARVISRIVSAADMLVEQPAIGRVGRIKGT CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH REAVLSDISYIIAYRVGRDIEILTIIHTSRRWPSAL HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]