Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is sam [H]
Identifier: 159184875
GI number: 159184875
Start: 1681377
End: 1682345
Strand: Direct
Name: sam [H]
Synonym: Atu1696
Alternate gene names: 159184875
Gene position: 1681377-1682345 (Clockwise)
Preceding gene: 15889001
Following gene: 15889003
Centisome position: 59.17
GC content: 60.89
Gene sequence:
>969_bases ATGGCATTGACGGACAATACGCGCGGCGCACTTTTCATGGCGCTCGCAATGGCAAGCTTCACGGCCAACGATGCGCTGAC GAAGTCCGTCACCCCCTACATCAATACCGGCCAGATCATGTTCGTGCGCGGCGTCATGACCGTGGTGCTGATCTATATCG CCGCCCGGCATTTCGGCGCGCTGCGGCCGCTGAAGACCCTGCTGCGGCCCATCATCATCCTGCGCTGTCTCTGCGAGGTG ACAGCCGCCGTTCTTTATCTGACGGCGCTCGGCCTCATTGAATTTTCCAACGCATCGGCCATCCTGCAATCCCTGCCGCT GGTGGTGACGCTGGGGGCCGCACTTTTCCTGCGCGAGCCGGTCGGCTGGCGGCGCTGGGTAGCCATCATCGTCGGTTTCA TTGGGGTGCTCGTCATCATCAGGCCCGGCCCTGAAGGTTTCACGCCGGGCGCGCTGCTGGTCGTCGCCTCGCTCGCCGTC ACCGCCGCGCGTGATCTCCTGACCCGGAAAATGTATGCCGATGTGCCCTCACTCGCCATCACCGTCATTACCGCCTTCGT CAACATGGCGGTGGGTGGGCTTCTGATCGTGCCTTTCGGCGGCTGGCAGCCGATGAATTTCACCATCGTATCGCATCTGG CCGGTTCGGCCATTCTGGTGCTGGTCGGTTATCAGGCCATCATCCTGTCGATGCGTACGGGCGAGATTTCCTTCGTCGCA CCCTTCCGTTACACCGGCCTGCTCTGGGGTTTCATGATCGGCGTGTTCTTCTTCAACGAAAAGATCGACAGCTACACGAT CATCGGCGCCATGATCGTCATCGGTTCGGGCCTTTATACCTTCTATCGCGAAAGCCTGCGCAAACGCTCGCAAATGGCCA AGCGCGCGGCCGCGACACCCACAGCCGCAACCACGGTACGACCGGCTTCCGTTACGAAAGCTACCGTAACGGAAGAGGCG GGAGAATAA
Upstream 100 bases:
>100_bases ACGTCTCTATGCATGGAGGAATGCGTGGTCGTGGCTGGGAGGCTGCCCACTTCGCCCGGCAAGGGCGGCGGGATACTGCG CATGGTCTGGGATATTTGGA
Downstream 100 bases:
>100_bases CATGAAGAGCAGCCGTTTCCTCGACCGAACCACCCCGCCCCATATCATCACGCTTGTGGTCATCGCCGGCGTCGCGGCGC TGTGCATGAACCTGTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MALTDNTRGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGALRPLKTLLRPIIILRCLCEV TAAVLYLTALGLIEFSNASAILQSLPLVVTLGAALFLREPVGWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAV TAARDLLTRKMYADVPSLAITVITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVA PFRYTGLLWGFMIGVFFFNEKIDSYTIIGAMIVIGSGLYTFYRESLRKRSQMAKRAAATPTAATTVRPASVTKATVTEEA GE
Sequences:
>Translated_322_residues MALTDNTRGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGALRPLKTLLRPIIILRCLCEV TAAVLYLTALGLIEFSNASAILQSLPLVVTLGAALFLREPVGWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAV TAARDLLTRKMYADVPSLAITVITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVA PFRYTGLLWGFMIGVFFFNEKIDSYTIIGAMIVIGSGLYTFYRESLRKRSQMAKRAAATPTAATTVRPASVTKATVTEEA GE >Mature_321_residues ALTDNTRGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGALRPLKTLLRPIIILRCLCEVT AAVLYLTALGLIEFSNASAILQSLPLVVTLGAALFLREPVGWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAVT AARDLLTRKMYADVPSLAITVITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVAP FRYTGLLWGFMIGVFFFNEKIDSYTIIGAMIVIGSGLYTFYRESLRKRSQMAKRAAATPTAATTVRPASVTKATVTEEAG E
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34630; Mature: 34499
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTDNTRGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGA CCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC LRPLKTLLRPIIILRCLCEVTAAVLYLTALGLIEFSNASAILQSLPLVVTLGAALFLREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCC VGWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAVTAARDLLTRKMYADVPSLAI CCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TVITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVA HHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEEECCCEEEEE PFRYTGLLWGFMIGVFFFNEKIDSYTIIGAMIVIGSGLYTFYRESLRKRSQMAKRAAATP CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC TAATTVRPASVTKATVTEEAGE CCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure ALTDNTRGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGA CCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCC LRPLKTLLRPIIILRCLCEVTAAVLYLTALGLIEFSNASAILQSLPLVVTLGAALFLREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCC VGWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAVTAARDLLTRKMYADVPSLAI CCHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TVITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVA HHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEEECCCEEEEE PFRYTGLLWGFMIGVFFFNEKIDSYTIIGAMIVIGSGLYTFYRESLRKRSQMAKRAAATP CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC TAATTVRPASVTKATVTEEAGE CCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA