Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ubiE [C]
Identifier: 159184844
GI number: 159184844
Start: 1611335
End: 1612198
Strand: Direct
Name: ubiE [C]
Synonym: Atu1625
Alternate gene names: 159184844
Gene position: 1611335-1612198 (Clockwise)
Preceding gene: 159184843
Following gene: 15888939
Centisome position: 56.71
GC content: 65.97
Gene sequence:
>864_bases ATGGCACAACAAAATGCGGAGCATATTGCCGACTGGAGAGGCCAAAGCGGGGAGCGCTGGGCCGCCTACCAGGCCCGGCT CGATGCCATGATGGCGCCATTCGGCCAAGCTGCGATCGAAGCCGCCGCGCCCACTACCGGCGAACGCGTACTGGACGTCG GCTGCGGCGCGGGGGCGTCCAGCCGAGATCTGGCCGCTCGCGTCGGCGCGGAGGGCCATGTGCTGGGCGTGGACATATCC GAACCGCTGATCGAGAGAGCCCGCGCCCTCGCGCCACAGGATATGTCGGTCGTGTTCCGGGTAACCGACGCCAGCAGGGC CGAGTTGCCCGACGGCGCGTTCGACATCCTGTTCTCACGTTTCGGGGTGATGTTCTTCAACGATCCGACAGGGGCGTTCG CCCATATGCGCCGTGCGCTCAAGCCGGGCGGGCGGGCCGCTTTTGTCTGCTGGCGCGGCGTGACTGAGAACGATTGGATG CGGTTGCCGATGGGCGCGATGAAGGGCATCCTCCCATCGATGACGCCGCCTGGTCCGGAAGCCCCCGGCCCGTTCTCGTT TGGCGACCAGGAGCGTGTGGAGCGCATCCTGACGAAGGCAGGGTTCACCGATATCGCTATCGAGCCTTTCGATGCTTCAG TCTCGTTTGGCGAGGGCGCAACACGGGACGCGGCGCTCGATGACGCAGTGAACATGACACTTGAGGTCGGCCCGTTGTCG CGGGTGCTCGCTGATCAGCCCGACGACATACGCGACCGCGCCTCGGTTGCGGTTCGTGCCGCTTTGTCGGGATGCCCCGG TGAGCGGTCGGTGATGATCAACGGCGCGACATGGATCGTCACCGCGCGCAATCCCGCAAGCTGA
Upstream 100 bases:
>100_bases GCCGGTCGGCCGTCGCCATGTTCATGGCCGCGCACGGTGGCGACGACCACGTGTGCGCACAGCCTGGTTAAGAACGGATC GGAAAAGAAAGGATGTGGAC
Downstream 100 bases:
>100_bases CAGGGATTAACAGTCGGCAGGCAGAATGCGGCGCGGGTCTCTCGGAGACAATTGGCGTCACGACGATAAATAAGGGAGGC CGGCAAGAAAGCCGGCCATG
Product: methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: Methyltransferase; Methyltransferase UbiE/COQ5 Family; UbiE/COQ5 Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Protein; UbiE/COQ5 Family Methlytransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methlytransferase UbiE/COQ5 Family Protein; Demethylmenaquinone Methyltransferase; UbiE/COQ5 Family Methyltransferase; Menaquinone Biosynthesis Methyltransferase UbiE; Aklanonic Acid Methyl Transferase; Sterol-C-Methyltransferase; Delta(24)-Sterol C-Methyltransferase; Methyltransferase Domain-Containing Protein; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; Methyltransferase S-Adenosyl-L-Methionine-MTase Protein; UbiE/COQ5 Methyltransferase Family; Methyltransferase Domain Family; Menaquinone Biosynthesis Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAQQNAEHIADWRGQSGERWAAYQARLDAMMAPFGQAAIEAAAPTTGERVLDVGCGAGASSRDLAARVGAEGHVLGVDIS EPLIERARALAPQDMSVVFRVTDASRAELPDGAFDILFSRFGVMFFNDPTGAFAHMRRALKPGGRAAFVCWRGVTENDWM RLPMGAMKGILPSMTPPGPEAPGPFSFGDQERVERILTKAGFTDIAIEPFDASVSFGEGATRDAALDDAVNMTLEVGPLS RVLADQPDDIRDRASVAVRAALSGCPGERSVMINGATWIVTARNPAS
Sequences:
>Translated_287_residues MAQQNAEHIADWRGQSGERWAAYQARLDAMMAPFGQAAIEAAAPTTGERVLDVGCGAGASSRDLAARVGAEGHVLGVDIS EPLIERARALAPQDMSVVFRVTDASRAELPDGAFDILFSRFGVMFFNDPTGAFAHMRRALKPGGRAAFVCWRGVTENDWM RLPMGAMKGILPSMTPPGPEAPGPFSFGDQERVERILTKAGFTDIAIEPFDASVSFGEGATRDAALDDAVNMTLEVGPLS RVLADQPDDIRDRASVAVRAALSGCPGERSVMINGATWIVTARNPAS >Mature_286_residues AQQNAEHIADWRGQSGERWAAYQARLDAMMAPFGQAAIEAAAPTTGERVLDVGCGAGASSRDLAARVGAEGHVLGVDISE PLIERARALAPQDMSVVFRVTDASRAELPDGAFDILFSRFGVMFFNDPTGAFAHMRRALKPGGRAAFVCWRGVTENDWMR LPMGAMKGILPSMTPPGPEAPGPFSFGDQERVERILTKAGFTDIAIEPFDASVSFGEGATRDAALDDAVNMTLEVGPLSR VLADQPDDIRDRASVAVRAALSGCPGERSVMINGATWIVTARNPAS
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 30533; Mature: 30402
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQNAEHIADWRGQSGERWAAYQARLDAMMAPFGQAAIEAAAPTTGERVLDVGCGAGAS CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCC SRDLAARVGAEGHVLGVDISEPLIERARALAPQDMSVVFRVTDASRAELPDGAFDILFSR CHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH FGVMFFNDPTGAFAHMRRALKPGGRAAFVCWRGVTENDWMRLPMGAMKGILPSMTPPGPE CCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCHHHHHHCCCCCCCCCCC APGPFSFGDQERVERILTKAGFTDIAIEPFDASVSFGEGATRDAALDDAVNMTLEVGPLS CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCHHHHHHHCCEEEECCHH RVLADQPDDIRDRASVAVRAALSGCPGERSVMINGATWIVTARNPAS HHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCC >Mature Secondary Structure AQQNAEHIADWRGQSGERWAAYQARLDAMMAPFGQAAIEAAAPTTGERVLDVGCGAGAS CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCC SRDLAARVGAEGHVLGVDISEPLIERARALAPQDMSVVFRVTDASRAELPDGAFDILFSR CHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH FGVMFFNDPTGAFAHMRRALKPGGRAAFVCWRGVTENDWMRLPMGAMKGILPSMTPPGPE CCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCHHHHHHCCCCCCCCCCC APGPFSFGDQERVERILTKAGFTDIAIEPFDASVSFGEGATRDAALDDAVNMTLEVGPLS CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCHHHHHHHCCEEEECCHH RVLADQPDDIRDRASVAVRAALSGCPGERSVMINGATWIVTARNPAS HHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA