Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is envR [C]
Identifier: 159184843
GI number: 159184843
Start: 1610646
End: 1611305
Strand: Direct
Name: envR [C]
Synonym: Atu1624
Alternate gene names: 159184843
Gene position: 1610646-1611305 (Clockwise)
Preceding gene: 159184842
Following gene: 159184844
Centisome position: 56.68
GC content: 57.27
Gene sequence:
>660_bases ATGGTGACTGAAAATAGTCAGAGCCGGCGCGGCCGGCCCGTCAACGAAGCACTTGGTCAAACGATCGTCGACACTGCAGG CGAACTCTTTGCGGAGCTGGGTTTTCAAGCGACGACATTGGACAAGGTCGCTCAGCGGGCGAAGATATCCAAACTCAGCA TCTATCGTCACTTCGAGAATAAAGAGGCGCTGTTTGGCGCAGCCTTTGCGGCCCGCTGCCATCAGTTAATACCACAGGTC CTTTTCGAAGGCGTCGACGGTTCGGCCGAAGATCAGCTCATGGCGGTGGGATCATCCCTGCTTCGGACGCTGTTGCGCCC GGACGTTCGCAGTGTCGAAGCCATGGTCACGGCCGATGTCACAAGTCAAAAGTCGTTGAGCAAGATTCATTACGAAGCCG GTCCCGCCCATATGATTGCCCAAATCGAGGCCTTGCTGCGTCAGTTGCACGCGAAGGCGCTTCTGAATGTGCCTGATCCT GTCCAGTCCGCCCGCCTGTTTGCCGCGCTTTTCAAAGGCTCTGATCTCCTGATTATTGCACGCTTCGATGAGGCGAGAGC AGAGGACGACAACGAAATCGAATCCTATTGCCGGTCGGCCGTCGCCATGTTCATGGCCGCGCACGGTGGCGACGACCACG TGTGCGCACAGCCTGGTTAA
Upstream 100 bases:
>100_bases CATGGCGCCCTCGTGTTTCGCTTAATTCTTCGGCTTGCTTATTTCAGAAACTCCATGGTATCCTAATTCCACAATAACGA TACTGTCAAGGACTGCAATT
Downstream 100 bases:
>100_bases GAACGGATCGGAAAAGAAAGGATGTGGACATGGCACAACAAAATGCGGAGCATATTGCCGACTGGAGAGGCCAAAGCGGG GAGCGCTGGGCCGCCTACCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; TetR-Type Transcriptional Regulator; Bacterial Regulatory Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MVTENSQSRRGRPVNEALGQTIVDTAGELFAELGFQATTLDKVAQRAKISKLSIYRHFENKEALFGAAFAARCHQLIPQV LFEGVDGSAEDQLMAVGSSLLRTLLRPDVRSVEAMVTADVTSQKSLSKIHYEAGPAHMIAQIEALLRQLHAKALLNVPDP VQSARLFAALFKGSDLLIIARFDEARAEDDNEIESYCRSAVAMFMAAHGGDDHVCAQPG
Sequences:
>Translated_219_residues MVTENSQSRRGRPVNEALGQTIVDTAGELFAELGFQATTLDKVAQRAKISKLSIYRHFENKEALFGAAFAARCHQLIPQV LFEGVDGSAEDQLMAVGSSLLRTLLRPDVRSVEAMVTADVTSQKSLSKIHYEAGPAHMIAQIEALLRQLHAKALLNVPDP VQSARLFAALFKGSDLLIIARFDEARAEDDNEIESYCRSAVAMFMAAHGGDDHVCAQPG >Mature_219_residues MVTENSQSRRGRPVNEALGQTIVDTAGELFAELGFQATTLDKVAQRAKISKLSIYRHFENKEALFGAAFAARCHQLIPQV LFEGVDGSAEDQLMAVGSSLLRTLLRPDVRSVEAMVTADVTSQKSLSKIHYEAGPAHMIAQIEALLRQLHAKALLNVPDP VQSARLFAALFKGSDLLIIARFDEARAEDDNEIESYCRSAVAMFMAAHGGDDHVCAQPG
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23821; Mature: 23821
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTENSQSRRGRPVNEALGQTIVDTAGELFAELGFQATTLDKVAQRAKISKLSIYRHFEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC KEALFGAAFAARCHQLIPQVLFEGVDGSAEDQLMAVGSSLLRTLLRPDVRSVEAMVTADV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TSQKSLSKIHYEAGPAHMIAQIEALLRQLHAKALLNVPDPVQSARLFAALFKGSDLLIIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE RFDEARAEDDNEIESYCRSAVAMFMAAHGGDDHVCAQPG ECCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVTENSQSRRGRPVNEALGQTIVDTAGELFAELGFQATTLDKVAQRAKISKLSIYRHFEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC KEALFGAAFAARCHQLIPQVLFEGVDGSAEDQLMAVGSSLLRTLLRPDVRSVEAMVTADV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TSQKSLSKIHYEAGPAHMIAQIEALLRQLHAKALLNVPDPVQSARLFAALFKGSDLLIIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE RFDEARAEDDNEIESYCRSAVAMFMAAHGGDDHVCAQPG ECCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA