Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184716
Identifier: 159184716
GI number: 159184716
Start: 1319283
End: 1320050
Strand: Reverse
Name: 159184716
Synonym: Atu1333
Alternate gene names: NA
Gene position: 1320050-1319283 (Counterclockwise)
Preceding gene: 159184717
Following gene: 159184715
Centisome position: 46.45
GC content: 58.2
Gene sequence:
>768_bases ATGGCGCATTTTCTCCGTTCCACCCTTCTCGCCAGCGTGACGGCCCTTTCAACGGTATTCGCCTGCCTGCCCGCGCATGC GCTCGATGAGCAGCAGAAGAAAGAAATGGGCGAGTTCATCAAGCAGTATCTGATCGAGAACCCGGAAATCATGCTCGAGG TTCAGGACGCGCTTGAACGCAAGCAATATGCTTCGCGCAACGCCAAGGCCGCGGAAGCGGTTGCCGACAACAAGAAGGCC ATCTTCGAATCGAAATACGACCTGGCGCTCGGCAATCCCGATGGCGACGTCACGCTGGTCGAATTTTTCGACTATAATTG CGGTTACTGCAAACGCGCCATGGGCGACATGGACAATATCCTGAAGGGCGACAAGAAGGTCCGCGTCGTCCTCAAGGAGT TCCCGATCCTCGGGCCGGAATCGGTTGCCGCACATCGCGTCTCCAACGCCGTGAAGCTTTTGGCGCCGGCCAAATATGCC GAATTCCAGCGCACCCTGCTCGGCGGCCGTGGACGGGCGAATGAAGACAGCGCTATGGAAGTCGCAACCTCGCTTGGCCT CAAGGAAGCCGATATCCGCAAATCGATGGCTGACAACCCCAATGACGCGCAGGTGCAGGAAACCTACAAGCTGGCAACCA GCCTCGGCATCACCGGAACGCCCTCCTATATCGTCGGCGACGAGGCGGTTTTCGGTGCTGTTGGTGCCGACCCGCTGAAG GAAAAAATCGCCAACATGCGCAGCTGCGGTAAAGCAACCTGCTCGTGA
Upstream 100 bases:
>100_bases ATGCGGACAAGTATTTTTGCCGTATGGCATTTGGCTTAAAGTAAGGTAATTGCCTTCATAAGATTTCAAGAGGCTGCGGC CGAACAGAATGAGGACCGAT
Downstream 100 bases:
>100_bases TTCAGATGAAAGGCCTTTATTGCCTGTGAGATAAGGGGCAGCCCCTGCGCTTTACGGCTTGCAGGGGCTTTTCCTTGAAG GCTGCGCAGTCTATAGGTGT
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; DSBA-Like Thioredoxin Domain Protein; Protein-Disulfide Isomerase; DsbA Oxidoreductase; Twin-Arginine Translocation Pathway Signal; DSBA-Like Thioredoxin Domain-Containing Protein; 27kDa Outer Membrane Protein; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; Disulfide Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity C; Suppressor For Copper-Sensitivity C; Metal Resistance Protein; Disulfide Bond Formation Protein D; DsbA-Like Disulfide Oxidoreductase; ThiolDisulfide Oxidoreductase; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; ThiolDisulfide Interchange Protein; Disulfide Bonded Thioredoxin Protein; Copper-Sensitivity Suppressor C Protein; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAHFLRSTLLASVTALSTVFACLPAHALDEQQKKEMGEFIKQYLIENPEIMLEVQDALERKQYASRNAKAAEAVADNKKA IFESKYDLALGNPDGDVTLVEFFDYNCGYCKRAMGDMDNILKGDKKVRVVLKEFPILGPESVAAHRVSNAVKLLAPAKYA EFQRTLLGGRGRANEDSAMEVATSLGLKEADIRKSMADNPNDAQVQETYKLATSLGITGTPSYIVGDEAVFGAVGADPLK EKIANMRSCGKATCS
Sequences:
>Translated_255_residues MAHFLRSTLLASVTALSTVFACLPAHALDEQQKKEMGEFIKQYLIENPEIMLEVQDALERKQYASRNAKAAEAVADNKKA IFESKYDLALGNPDGDVTLVEFFDYNCGYCKRAMGDMDNILKGDKKVRVVLKEFPILGPESVAAHRVSNAVKLLAPAKYA EFQRTLLGGRGRANEDSAMEVATSLGLKEADIRKSMADNPNDAQVQETYKLATSLGITGTPSYIVGDEAVFGAVGADPLK EKIANMRSCGKATCS >Mature_254_residues AHFLRSTLLASVTALSTVFACLPAHALDEQQKKEMGEFIKQYLIENPEIMLEVQDALERKQYASRNAKAAEAVADNKKAI FESKYDLALGNPDGDVTLVEFFDYNCGYCKRAMGDMDNILKGDKKVRVVLKEFPILGPESVAAHRVSNAVKLLAPAKYAE FQRTLLGGRGRANEDSAMEVATSLGLKEADIRKSMADNPNDAQVQETYKLATSLGITGTPSYIVGDEAVFGAVGADPLKE KIANMRSCGKATCS
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27734; Mature: 27603
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFLRSTLLASVTALSTVFACLPAHALDEQQKKEMGEFIKQYLIENPEIMLEVQDALER CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH KQYASRNAKAAEAVADNKKAIFESKYDLALGNPDGDVTLVEFFDYNCGYCKRAMGDMDNI HHHHHCCCHHHHHHHCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCHHHHHHHCCHHHH LKGDKKVRVVLKEFPILGPESVAAHRVSNAVKLLAPAKYAEFQRTLLGGRGRANEDSAME HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHH VATSLGLKEADIRKSMADNPNDAQVQETYKLATSLGITGTPSYIVGDEAVFGAVGADPLK HHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHH EKIANMRSCGKATCS HHHHHHHHCCCCCCC >Mature Secondary Structure AHFLRSTLLASVTALSTVFACLPAHALDEQQKKEMGEFIKQYLIENPEIMLEVQDALER HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH KQYASRNAKAAEAVADNKKAIFESKYDLALGNPDGDVTLVEFFDYNCGYCKRAMGDMDNI HHHHHCCCHHHHHHHCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCHHHHHHHCCHHHH LKGDKKVRVVLKEFPILGPESVAAHRVSNAVKLLAPAKYAEFQRTLLGGRGRANEDSAME HCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHH VATSLGLKEADIRKSMADNPNDAQVQETYKLATSLGITGTPSYIVGDEAVFGAVGADPLK HHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCHHH EKIANMRSCGKATCS HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA